RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 PLATP00750 562 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 SERPINA3P01011 423 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 IGKV1D-12P01611 117 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 CALCBP10092 127 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 PIPP12273 146 aaPredicted RBP8.03□□□□□ -1.12
YBX3-212ENST00000542002 AZGP1P25311 298 aaKnown RBP8.03□□□□□ -1.12
YBX3-212ENST00000542002 PRDX2P32119 198 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 GABRA2P47869 451 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 NPBWR2P48146 333 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 DLX1P56177 255 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 MTCP1P56278 107 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 RPS11P62280 158 aaKnown RBP eCLIP8.03□□□□□ -1.12
YBX3-212ENST00000542002 ARF6P62330 175 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 PRB3Q04118 309 aaPredicted RBP8.03□□□□□ -1.12
YBX3-212ENST00000542002 CDK5R1Q15078 307 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 CCDC58Q4VC31 144 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 C6orf141Q5SZD1 244 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 CD276Q5ZPR3 534 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 DMKNQ6E0U4 476 aaPredicted RBP8.03□□□□□ -1.12
YBX3-212ENST00000542002 RPL22L1Q6P5R6 122 aaKnown RBP8.03□□□□□ -1.12
YBX3-212ENST00000542002 BTNL3Q6UXE8 466 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 SLC25A26Q70HW3 274 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 AHSA2Q719I0 299 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 SLC36A1Q7Z2H8 476 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 ZFP41Q8N8Y5 198 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 OR13C5Q8NGS8 318 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 OR13C9Q8NGT0 318 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 SLAMF9Q96A28 289 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 UPRTQ96BW1 309 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 ORAI1Q96D31 301 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 SDSLQ96GA7 329 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 MRPL48Q96GC5 212 aaKnown RBP8.03□□□□□ -1.12
YBX3-212ENST00000542002 ZNF48Q96MX3 618 aaPredicted RBP8.03□□□□□ -1.12
YBX3-212ENST00000542002 PKIBQ9C010 78 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 DNTTIP1Q9H147 329 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 CNTD2Q9H8S5 307 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 ELL3Q9HB65 397 aaPredicted RBP8.03□□□□□ -1.12
YBX3-212ENST00000542002 ESM1Q9NQ30 184 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 CNOT2Q9NZN8 540 aaKnown RBP8.03□□□□□ -1.12
YBX3-212ENST00000542002 IL36RNQ9UBH0 155 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 NUP50Q9UKX7 468 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 EXOSC1Q9Y3B2 195 aaKnown RBP8.03□□□□□ -1.12
YBX3-212ENST00000542002 IRGMA1A4Y4 181 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 EFCAB10A6NFE3 127 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 ZNF879B4DU55 563 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 PTGES3LE9PB15 166 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 SPRY1O43609 319 aaPredicted RBP8.02□□□□□ -1.13
YBX3-212ENST00000542002 NDUFB3O43676 98 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 ENSAO43768 121 aaKnown RBP8.02□□□□□ -1.13
YBX3-212ENST00000542002 NXPH2O95156 264 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 ATP6V1G2O95670 118 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 MT-ND2P03891 347 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 PPIAL4GP0DN37 164 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 ZNF20P17024 532 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 BCL3P20749 454 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 SOX2P48431 317 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 RBP2P50120 134 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 IL13RA1P78552 427 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 MRPL28Q13084 256 aaKnown RBP8.02□□□□□ -1.13
YBX3-212ENST00000542002 PDZK1IP1Q13113 114 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 RIPK1Q13546 671 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 ZNF529Q6P280 563 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 TMPRSS11AQ6ZMR5 421 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 PHC2Q8IXK0 858 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 PARP16Q8N5Y8 322 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 Q8N7P7 452 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 NANOGP1Q8N7R0 232 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 DNAAF1Q8NEP3 725 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 OR51A2Q8NGJ7 313 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 OR52N1Q8NH53 320 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 GHSRQ92847 366 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 RFT1Q96AA3 541 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 BORCS8Q96FH0 119 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 MED30Q96HR3 178 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 WDFY2Q96P53 400 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 MYCBPQ99417 103 aaPredicted RBP8.02□□□□□ -1.13
YBX3-212ENST00000542002 NKX3-1Q99801 234 aaPredicted RBP8.02□□□□□ -1.13
YBX3-212ENST00000542002 DCTN5Q9BTE1 182 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 MRI1Q9BV20 369 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 SIRPDQ9H106 197 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 VCXQ9H320 206 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 ZCCHC4Q9H5U6 513 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 RBFOX1Q9NWB1 397 aaKnown RBP8.02□□□□□ -1.13
YBX3-212ENST00000542002 SLC25A10Q9UBX3 287 aaPredicted RBP8.02□□□□□ -1.13
YBX3-212ENST00000542002 POLDIP2Q9Y2S7 368 aa8.02□□□□□ -1.13
YBX3-212ENST00000542002 CENPVL3A0A0U1RRI6 287 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 TCF21O43680 179 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 ANGPTL7O43827 346 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 TOX4O94842 621 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 ECDO95905 644 aaPredicted RBP8.01□□□□□ -1.13
YBX3-212ENST00000542002 CDK1P06493 297 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 LIPFP07098 398 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 CCDC159P0C7I6 412 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 NDUFB7P17568 137 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 MYL12AP19105 171 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 MYF6P23409 242 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 DUSP1P28562 367 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 ATP1B3P54709 279 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 ERVFRD-1P60508 538 aa8.01□□□□□ -1.13
YBX3-212ENST00000542002 CNN3Q15417 329 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms