RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 DNAAF1Q8NEP3 725 aa13.08□□□□□ -0.32
DDB1-216ENST00000539739 TRMT10AQ8TBZ6 339 aaKnown RBP13.08□□□□□ -0.32
DDB1-216ENST00000539739 NPRL2Q8WTW4 380 aa13.08□□□□□ -0.32
DDB1-216ENST00000539739 ST6GAL2Q96JF0 529 aa13.08□□□□□ -0.32
DDB1-216ENST00000539739 OR51E2Q9H255 320 aa13.08□□□□□ -0.32
DDB1-216ENST00000539739 MMP27Q9H306 513 aa13.08□□□□□ -0.32
DDB1-216ENST00000539739 ZNF701Q9NV72 531 aaPredicted RBP13.08□□□□□ -0.32
DDB1-216ENST00000539739 BEX4Q9NWD9 120 aaPredicted RBP13.08□□□□□ -0.32
DDB1-216ENST00000539739 FBN2P35556 2912 aa13.08□□□□□ -0.32
DDB1-216ENST00000539739 IGKV1-9A0A0C4DH69 117 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 FAM230AA0A1W2PPH8 454 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 PIN1P1O15428 100 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 F12P00748 615 aaPredicted RBP13.07□□□□□ -0.32
DDB1-216ENST00000539739 GRPP07492 148 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 HCKP08631 526 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 IGFBP3P17936 291 aaPredicted RBP13.07□□□□□ -0.32
DDB1-216ENST00000539739 SRMP19623 302 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 FGF9P31371 208 aaPredicted RBP13.07□□□□□ -0.32
DDB1-216ENST00000539739 RBP2P50120 134 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 ATP1B3P54709 279 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 FAM27D1Q5T7N8 215 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 ZNF529Q6P280 563 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 GDPGP1Q6ZNW5 385 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 LHFPL2Q6ZUX7 228 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 ERGIC1Q969X5 290 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 ORAI1Q96D31 301 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 CPNE2Q96FN4 548 aaPredicted RBP13.07□□□□□ -0.32
DDB1-216ENST00000539739 GAL3ST1Q99999 423 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 CHCHD6Q9BRQ6 235 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 BARX1Q9HBU1 254 aaPredicted RBP13.07□□□□□ -0.32
DDB1-216ENST00000539739 TMEM138Q9NPI0 162 aa13.07□□□□□ -0.32
DDB1-216ENST00000539739 LOC100506127A0A0U1RQW1 187 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 LOC100289279A0A1B0GTE1 492 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 ST8SIA5O15466 376 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 AIREO43918 545 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 NCR1O76036 304 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 HPXP02790 462 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 PAX1P15863 534 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 BDKRB2P30411 391 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 THBS2P35442 1172 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 GATA4P43694 442 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 ATP5J2P56134 94 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 MTCP1P56278 107 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 FAM76BQ5HYJ3 339 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 C22orf42Q6IC83 251 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 ZNF573Q86YE8 665 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 TCTE3Q8IZS6 198 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 FUNDC2Q9BWH2 189 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 GSX2Q9BZM3 304 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 FN3KRPQ9HA64 309 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 TXNL4BQ9NX01 149 aaKnown RBP13.06□□□□□ -0.32
DDB1-216ENST00000539739 ING3Q9NXR8 418 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 PPP1R3CQ9UQK1 317 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 TACC2O95359 2948 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 TRAV8-7A0A075B6U6 113 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 IGHV3-64DA0A0J9YX35 117 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 PQLC2LA1A4F0 135 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 LRP5LA4QPB2 252 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 MEGF11A6BM72 1044 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 PCP4L1A6NKN8 68 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 A6NLC8 198 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 PTBP3O95758 552 aaKnown RBP13.06□□□□□ -0.32
DDB1-216ENST00000539739 MAS1P04201 325 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 ALDOBP05062 364 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 MYL9P24844 172 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 PTH2RP49190 550 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 ZNF154Q13106 437 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 DEFB113Q30KQ7 82 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 PRAMEF6Q5VXH4 476 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 ASPHD2Q6ICH7 369 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 ZNF782Q6ZMW2 699 aaPredicted RBP13.06□□□□□ -0.32
DDB1-216ENST00000539739 CDH24Q86UP0 819 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 OR51A2Q8NGJ7 313 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 SNAPC3Q92966 411 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 MBD6Q96DN6 1003 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 FGF23Q9GZV9 251 aaPredicted RBP13.06□□□□□ -0.32
DDB1-216ENST00000539739 PPIL3Q9H2H8 161 aaKnown RBP13.06□□□□□ -0.32
DDB1-216ENST00000539739 SNTG1Q9NSN8 517 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 UFSP2Q9NUQ7 469 aa13.06□□□□□ -0.32
DDB1-216ENST00000539739 APCP25054 2843 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 FLNBO75369 2602 aaKnown RBP13.05□□□□□ -0.32
DDB1-216ENST00000539739 IGHV1-69-2A0A0G2JMI3 117 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 A0A0X1KG70 313 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 IFNL4K9M1U5 179 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 NDUFS7O75251 213 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 DAOP14920 347 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 MRPS11P82912 194 aaKnown RBP13.05□□□□□ -0.32
DDB1-216ENST00000539739 DDI2Q5TDH0 399 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 MOGAT3Q86VF5 341 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 NKAIN3Q8N8D7 197 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 DTX3Q8N9I9 347 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 OR11L1Q8NGX0 322 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 RDH5Q92781 318 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 PERPQ96FX8 193 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 KCTD7Q96MP8 289 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 GPER1Q99527 375 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 CCDC32Q9BV29 185 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 OR51I2Q9H344 312 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 GCM1Q9NP62 436 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 DLL4Q9NR61 685 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms