RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 IGKV1-27A0A075B6S5 117 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CLDN25C9JDP6 229 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 SYNGR1O43759 233 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CDC14BO60729 498 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CLDN1O95832 211 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 VSIG8P0DPA2 414 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 MGMTP16455 207 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 IGFBP2P18065 325 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ELK1P19419 428 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 RAB6AP20340 208 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 BCL3P20749 454 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 GLRA1P23415 457 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CPT2P23786 658 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 VEGFCP49767 419 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ZNF45Q02386 682 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 TLE4Q04727 773 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CARTPTQ16568 116 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 FAM209AQ5JX71 171 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ATAD3CQ5T2N8 411 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 RAB12Q6IQ22 244 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CNIH2Q6PI25 160 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 BAIAP2L2Q6UXY1 529 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 KRT74Q7RTS7 529 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 RNF144BQ7Z419 303 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 PEG10Q86TG7 708 aaKnown RBP9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 LAX1Q8IWV1 398 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CMTM4Q8IZR5 234 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 C1orf87Q8N0U7 546 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 FAM58AQ8N1B3 248 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CELF2-AS1Q8N7Q2 184 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ACBD4Q8NC06 268 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 OR56B1Q8NGI3 324 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 LILRB1Q8NHL6 650 aaPredicted RBP9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 NEK7Q8TDX7 302 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 C15orf40Q8WUR7 153 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 AQP3Q92482 292 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ERGIC1Q969X5 290 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 SLC25A28Q96A46 364 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 NEDD4LQ96PU5 975 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 KCNK15Q9H427 330 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 TREM2Q9NZC2 230 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 RABL2AQ9UBK7 228 aaPredicted RBP9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 RABL2BQ9UNT1 228 aa9.05□□□□□ -0.96
TNFRSF1A-211ENST00000538363 LRRK2Q5S007 2527 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 TENM4Q6N022 2769 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 SPTAN1Q13813 2472 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 TRAV18A0A075B6X5 111 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 J3QL48 77 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 AKR7A2O43488 359 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 EIF4EP06730 217 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CHRM2P08172 466 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 PPOXP50336 477 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ZP1P60852 638 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ZNF154Q13106 437 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 MAB21L1Q13394 359 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 LSAMPQ13449 338 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 MPPED2Q15777 294 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 HFEQ30201 348 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 TMEM255AQ5JRV8 349 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 NKAPLQ5M9Q1 402 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 C20orf204Q6ZNR8 217 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 LINC00299Q6ZSB3 139 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ZNF826PQ6ZT77 177 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 C1QL2Q7Z5L3 287 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 IZUMO1Q8IYV9 350 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 OR8H2Q8N162 312 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ZCCHC24Q8N2G6 241 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CCL17Q92583 94 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 PTX4Q96A99 478 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 MRPS24Q96EL2 167 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ZNF488Q96MN9 340 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CACNG6Q9BXT2 260 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 RNF7Q9UBF6 113 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 OR14J1Q9UGF5 321 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ST3GAL6Q9Y274 331 aa9.04□□□□□ -0.96
TNFRSF1A-211ENST00000538363 IFNL4K9M1U5 179 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 SH2D1BO14796 132 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 DEGS1O15121 323 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CTAG2O75638 210 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 RHBDL1O75783 438 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 OR7C1O76099 320 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ZNF44P15621 663 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 LOXP28300 417 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 BLVRBP30043 206 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 GABRA2P47869 451 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 IKZF1Q13422 519 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ARFRP1Q13795 201 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ARL6IP1Q15041 203 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 SMIM21Q3B7S5 101 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 FAM166AQ6J272 317 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 C16orf87Q6PH81 154 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 METAP1DQ6UB28 335 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 Q6ZTK2 550 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CDH24Q86UP0 819 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 SNX29P2Q8IUI4 249 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 OR4M1Q8NGD0 313 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 NEU4Q8WWR8 484 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CCL19Q99731 98 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ABCG5Q9H222 651 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 RHOFQ9HBH0 211 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms