RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 HTR1AP08908 422 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 IGHV4-30-4P0DP06 118 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 CTLA4P16410 223 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 AMY2BP19961 511 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 CNTFRP26992 372 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 RBM34P42696 430 aaKnown RBP7.22□□□□□ -1.25
USP28-205ENST00000537706 HMGA2P52926 109 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 NEDD8Q15843 81 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 ZNF626Q68DY1 528 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 XAF1Q6GPH4 301 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 CLVS1Q8IUQ0 354 aaPredicted RBP7.22□□□□□ -1.25
USP28-205ENST00000537706 ERI1Q8IV48 349 aaKnown RBP7.22□□□□□ -1.25
USP28-205ENST00000537706 DRAM1Q8N682 238 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 SMYD1Q8NB12 490 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 GPR32P1Q8NGA4 272 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 OR13F1Q8NGS4 319 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 CNIH3Q8TBE1 160 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 HRASLS5Q96KN8 279 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 DHRS1Q96LJ7 313 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 RBM14Q96PK6 669 aaKnown RBP7.22□□□□□ -1.25
USP28-205ENST00000537706 ST6GALNAC5Q9BVH7 336 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 ISYNA1Q9NPH2 558 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 NLKQ9UBE8 527 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 SERPINE3A8MV23 424 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 A8MZ25 164 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 NOL3O60936 208 aaKnown RBP7.21□□□□□ -1.25
USP28-205ENST00000537706 GADD45GO95257 159 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 ACSM4P0C7M7 580 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 SPNP16150 400 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 DDOSTP39656 456 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 SNAPC1Q16533 368 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 DUSP7Q16829 419 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 TEX38Q6PEX7 206 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 SPARTQ8N0X7 666 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 RPP25LQ8N5L8 163 aaKnown RBP7.21□□□□□ -1.25
USP28-205ENST00000537706 CYB561A3Q8NBI2 242 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 ANGPTL6Q8NI99 470 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 LIPHQ8WWY8 451 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 MUL1Q969V5 352 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 SEH1LQ96EE3 360 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 FEVQ99581 238 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 ZNF426Q9BUY5 554 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 GHITMQ9H3K2 345 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 RERGLQ9H628 205 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 MEPEQ9NQ76 525 aaPredicted RBP7.21□□□□□ -1.25
USP28-205ENST00000537706 C19orf12Q9NSK7 152 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 PAK1IP1Q9NWT1 392 aaPredicted RBP7.21□□□□□ -1.25
USP28-205ENST00000537706 SH3GLB1Q9Y371 365 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 TPRKBQ9Y3C4 175 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 SNX5Q9Y5X3 404 aa7.21□□□□□ -1.25
USP28-205ENST00000537706 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.21□□□□□ -1.26
USP28-205ENST00000537706 H7C1C5 153 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 J3KTA2 159 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 PTP4A3O75365 173 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 CCNB2O95067 398 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 OR8U8P0C7N1 319 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 EPHA2P29317 976 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 CENPAP49450 140 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 LCN6P62502 163 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 CSNK2BP67870 215 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 DEFB136Q30KP8 78 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 CFAP77Q6ZQR2 320 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 TMPRSS11FQ6ZWK6 438 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 FOXRED2Q8IWF2 684 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 LNX2Q8N448 690 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 OR11H6Q8NGC7 330 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 OR2T27Q8NH04 317 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 PFN4Q8NHR9 129 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 MICU1Q9BPX6 476 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 GON7Q9BXV9 100 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 ZNF556Q9HAH1 456 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 SCN3BQ9NY72 215 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 GRHPRQ9UBQ7 328 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 MED31Q9Y3C7 131 aa7.21□□□□□ -1.26
USP28-205ENST00000537706 HTR3EA5X5Y0 456 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 NUPR2A6NF83 97 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 OR2AT4A6NND4 320 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 H3BMQ9 156 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 H3BSH0 61 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 CCRL2O00421 344 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 CDIPTO14735 213 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 SAP30O75446 220 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 TSPAN19P0C672 248 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 IGHV1-8P0DP01 117 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 FMO3P31513 532 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 TMBIM6P55061 237 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 SMIM11AP58511 58 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 TMEM200BQ69YZ2 307 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 C11orf53Q8IXP5 236 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 ENTHD1Q8IYW4 607 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 BPIFB6Q8NFQ5 453 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 OR9Q2Q8NGE9 314 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 OR56B2PQ8NGI1 322 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 OR2AJ1Q8NGZ0 328 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 OR52J3Q8NH60 311 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 SPTSSAQ969W0 71 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 NIPSNAP1Q9BPW8 284 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 DUSP21Q9H596 190 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 C19orf73Q9NVV2 129 aa7.2□□□□□ -1.26
USP28-205ENST00000537706 MOB4Q9Y3A3 225 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms