RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, human

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKA-208	ENST00000533910		H3BSH0	61 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	WDR1	O75083	606 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	DHRS3	O75911	302 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	UBL3	O95164	117 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	MAS1	P04201	325 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	CSF3	P09919	207 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	EGR2	P11161	476 aa	Predicted RBP	4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	IL7	P13232	177 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	COX5A	P20674	150 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	AZGP1	P25311	298 aa	Known RBP	4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	PTGER4	P35408	488 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	TAGLN2	P37802	199 aa	Known RBP	4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	TALDO1	P37837	337 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	MNDA	P41218	407 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	HTR5A	P47898	357 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	TDGF1P3	P51864	188 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	ARHGDIB	P52566	201 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	CAPZA1	P52907	286 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	SNU13	P55769	128 aa	Known RBP	4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	TPTE	P56180	551 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	ATP5I	P56385	69 aa	Predicted RBP	4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	SUMO2	P61956	95 aa	Known RBP	4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	GALK2	Q01415	458 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	SCGB2A2	Q13296	93 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	P2RY14	Q15391	338 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.91	□□□□□ -1.62	6e-14	■■■■■ 46.9
CHKA-208	ENST00000533910	RAB11B	Q15907	218 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	PABPC1L2A	Q5JQF8	200 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	PLAC9	Q5JTB6	97 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	C1orf100	Q5SVJ3	147 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	HES5	Q5TA89	166 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	GLT8D1	Q68CQ7	371 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	OR2A2	Q6IF42	318 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	ACSM6	Q6P461	480 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	ANKRD16	Q6P6B7	361 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	DCDC5	Q6ZRR9	648 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	COLCA1	Q6ZS62	124 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910		Q6ZT83	130 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	PGAP1	Q75T13	922 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	SERPINA12	Q8IW75	414 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	OR5AS1	Q8N127	324 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	CENPS	Q8N2Z9	138 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	C9orf106	Q8NAJ2	232 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	DNAAF1	Q8NEP3	725 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	OR1M1	Q8NGA1	313 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	OR51A2	Q8NGJ7	313 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	OR6M1	Q8NGM8	313 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	OR6K3	Q8NGY3	331 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	AKR7L	Q8NHP1	331 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	SSC4D	Q8WTU2	575 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	RAB40A	Q8WXH6	277 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	SLC7A6	Q92536	515 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	BCL2L2	Q92843	193 aa	Predicted RBP	4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	SLC25A28	Q96A46	364 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	TMEM186	Q96B77	213 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	C10orf35	Q96D05	121 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	PGAM5	Q96HS1	289 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	LYZL4	Q96KX0	146 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	ZFP3	Q96NJ6	502 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	ABCG5	Q9H222	651 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	RGCC	Q9H4X1	137 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	METTL17	Q9H7H0	456 aa	Predicted RBP	4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	SP140L	Q9H930	580 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	NOX3	Q9HBY0	568 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	TMEM138	Q9NPI0	162 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	ABCB10	Q9NRK6	738 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	B3GNT2	Q9NY97	397 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	UPB1	Q9UBR1	384 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	TBC1D24	Q9ULP9	559 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	TP53TG5	Q9Y2B4	290 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	FAM215A	Q9Y5M1	114 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910		V9GYS6	101 aa		4.91	□□□□□ -1.62
CHKA-208	ENST00000533910	NCOR2	Q9Y618	2525 aa		4.9	□□□□□ -1.62
CHKA-208	ENST00000533910		A0A0G2JMP0	313 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910		A0A0X1KG70	313 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	hCG_38984	A0A1B0GV85	526 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	SERTM2	A0A1B0GWG4	89 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	MFSD2B	A6NFX1	497 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	FAM25A	B3EWG3	89 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	FAM25C	B3EWG5	89 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	FAM25G	B3EWG6	89 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	SLC33A1	O00400	549 aa	Predicted RBP	4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	LDLRAD4	O15165	306 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	CTDSPL	O15194	276 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	RHBDL1	O75783	438 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	TNFSF13	O75888	250 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	HLA-H	P01893	362 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	ALDOB	P05062	364 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	CRH	P06850	196 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	ERCC1	P07992	297 aa	Predicted RBP	4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	PATE4	P0C8F1	98 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	PRF1	P14222	555 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	GABRA1	P14867	456 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	ZNF20	P17024	532 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	RAB3A	P20336	220 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	IGHV1-2	P23083	117 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	BDKRB2	P30411	391 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	ARR3	P36575	388 aa		4.9	□□□□□ -1.63
CHKA-208	ENST00000533910	CLDN12	P56749	244 aa		4.9	□□□□□ -1.63

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