RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 DNM1P46Q6ZS02 220 aa14.65□□□□□ -0.06
NXF1-216ENST00000533499 POC1AQ8NBT0 407 aa14.65□□□□□ -0.06
NXF1-216ENST00000533499 OR10K1Q8NGX5 313 aa14.65□□□□□ -0.06
NXF1-216ENST00000533499 EMG1Q92979 244 aaKnown RBP14.65□□□□□ -0.06
NXF1-216ENST00000533499 KCTD7Q96MP8 289 aa14.65□□□□□ -0.06
NXF1-216ENST00000533499 CENPOQ9BU64 300 aa14.65□□□□□ -0.06
NXF1-216ENST00000533499 MTCH1Q9NZJ7 389 aa14.65□□□□□ -0.06
NXF1-216ENST00000533499 OR14J1Q9UGF5 321 aa14.65□□□□□ -0.06
NXF1-216ENST00000533499 MRPS28Q9Y2Q9 187 aaKnown RBP14.65□□□□□ -0.06
NXF1-216ENST00000533499 TRAV38-1A0A0B4J264 116 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 IGHV4-61A0A0C4DH41 118 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 VWC2LB2RUY7 222 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 H7C1Q1 480 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 HTR3BO95264 441 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 LHBP01229 141 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 IGHV2-70P01814 119 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 GYPAP02724 150 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 PGA5P0DJD9 388 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 USF1P22415 310 aaPredicted RBP14.64□□□□□ -0.07
NXF1-216ENST00000533499 MPZP25189 248 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 FGF9P31371 208 aaPredicted RBP14.64□□□□□ -0.07
NXF1-216ENST00000533499 PTGFRP43088 359 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 GABRA2P47869 451 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 NPBWR2P48146 333 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 ALDH3B2P48448 385 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 MICBQ29980 383 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 SMIM21Q3B7S5 101 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 AWAT2Q6E213 333 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 MUC20Q8N307 709 aaPredicted RBP14.64□□□□□ -0.07
NXF1-216ENST00000533499 CNTD2Q9H8S5 307 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 TMEM165Q9HC07 324 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 RBFOX1Q9NWB1 397 aaKnown RBP14.64□□□□□ -0.07
NXF1-216ENST00000533499 CSMD1Q96PZ7 3565 aa14.64□□□□□ -0.07
NXF1-216ENST00000533499 IGKV1-12A0A0C4DH73 117 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 F8VVB4 439 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 F8VWA3 439 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 IGKV1D-12P01611 117 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 TFF1P04155 84 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 PRKACAP17612 351 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 ZP1P60852 638 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 KCNJ8Q15842 424 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 SLC22A6Q4U2R8 563 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 GLIPR1L1Q6UWM5 242 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 ACP7Q6ZNF0 438 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 C1QL2Q7Z5L3 287 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 LRRC28Q86X40 367 aaPredicted RBP14.63□□□□□ -0.07
NXF1-216ENST00000533499 CLVS1Q8IUQ0 354 aaPredicted RBP14.63□□□□□ -0.07
NXF1-216ENST00000533499 SPICQ8N5J4 248 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 CLDND2Q8NHS1 167 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 FOXRED1Q96CU9 486 aaPredicted RBP14.63□□□□□ -0.07
NXF1-216ENST00000533499 NRIP2Q9BQI9 281 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 TMEM246Q9BRR3 403 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 METTL9Q9H1A3 318 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 NLKQ9UBE8 527 aa14.63□□□□□ -0.07
NXF1-216ENST00000533499 TEX15Q9BXT5 2789 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 TRAV1-2A0A0B4J238 106 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 SHISA3A0PJX4 238 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.62□□□□□ -0.07
NXF1-216ENST00000533499 ADAM20O43506 726 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 CSTBP04080 98 aaKnown RBP14.62□□□□□ -0.07
NXF1-216ENST00000533499 RPS2P15880 293 aaKnown RBP14.62□□□□□ -0.07
NXF1-216ENST00000533499 RAB3BP20337 219 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 SERPINA2P20848 420 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 TGFBR1P36897 503 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 CFHR2P36980 270 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 OR10A3P58181 314 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 P2RY14Q15391 338 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 ZNF404Q494X3 552 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 HES5Q5TA89 166 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 CRIP3Q6Q6R5 217 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 FIP1L1Q6UN15 594 aaKnown RBP14.62□□□□□ -0.07
NXF1-216ENST00000533499 GDPGP1Q6ZNW5 385 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 FAM90A1Q86YD7 464 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 Q8IYB0 196 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 FAM58AQ8N1B3 248 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 ZSCAN4Q8NAM6 433 aaPredicted RBP14.62□□□□□ -0.07
NXF1-216ENST00000533499 OR4D6Q8NGJ1 314 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 CCL13Q99616 98 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 NAA50Q9GZZ1 169 aaKnown RBP14.62□□□□□ -0.07
NXF1-216ENST00000533499 RASL12Q9NYN1 266 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 V9GY05 133 aa14.62□□□□□ -0.07
NXF1-216ENST00000533499 ITPR3Q14573 2671 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 NKX6-3A6NJ46 265 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 OR2AT4A6NND4 320 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 CEACAM18A8MTB9 384 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 HEXAP06865 529 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 SFTPBP07988 381 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 CLEC2LP0C7M8 214 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 MUC1P15941 1255 aaPredicted RBP14.61□□□□□ -0.07
NXF1-216ENST00000533499 HTR2CP28335 458 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 DUSP1P28562 367 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 SDC2P34741 201 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 CEBPDP49716 269 aaPredicted RBP14.61□□□□□ -0.07
NXF1-216ENST00000533499 SCN1BQ07699 218 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 RAB11BQ15907 218 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 TMEM155Q4W5P6 130 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 LYPD2Q6UXB3 125 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 CDH26Q8IXH8 852 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 SAXO1Q8IYX7 474 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 GFI1Q99684 422 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms