RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SETD9Q8NE22 299 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 OR10AC1Q8NH08 325 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 ZFAND2BQ8WV99 257 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 WDFY2Q96P53 400 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 NRIP2Q9BQI9 281 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 JAM3Q9BX67 310 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 MS4A7Q9GZW8 240 aaPredicted RBP12.7□□□□□ -0.38
CPSF1-210ENST00000532935 ZNF696Q9H7X3 374 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 CNTD2Q9H8S5 307 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 ESM1Q9NQ30 184 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 SLC25A10Q9UBX3 287 aaPredicted RBP12.7□□□□□ -0.38
CPSF1-210ENST00000532935 HHLA2Q9UM44 414 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 IGKV1-27A0A075B6S5 117 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 NXPH2O95156 264 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 LIMS3P0CW19 117 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 LIMS4P0CW20 117 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 ZNF20P17024 532 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 ARF6P62330 175 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 IL24Q13007 206 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 MRPL28Q13084 256 aaKnown RBP12.69□□□□□ -0.38
CPSF1-210ENST00000532935 GPR157Q5UAW9 335 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 RBMS3Q6XE24 437 aaKnown RBP12.69□□□□□ -0.38
CPSF1-210ENST00000532935 LY6G5BQ8NDX9 201 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 OR51A4Q8NGJ6 313 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 H1FXQ92522 213 aaKnown RBP12.69□□□□□ -0.38
CPSF1-210ENST00000532935 FGGYQ96C11 551 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 BORCS8Q96FH0 119 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 SDSLQ96GA7 329 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 TBX15Q96SF7 602 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 DCTN5Q9BTE1 182 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 SIRPDQ9H106 197 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 HES4Q9HCC6 221 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 MAB21L2Q9Y586 359 aa12.69□□□□□ -0.38
CPSF1-210ENST00000532935 DSCAML1Q8TD84 2053 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 IRGMA1A4Y4 181 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 RFPL4AA6NLU0 287 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 E9PI62 339 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 RFPL4AL1F8VTS6 287 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 TRIM77I1YAP6 450 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 NDUFB7P17568 137 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 DCKP27707 260 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 GBX2P52951 348 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-210ENST00000532935 CAV3P56539 151 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 BRD3OSQ6XYD6 125 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 UTS2BQ765I0 119 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 C8orf59Q8N0T1 100 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-210ENST00000532935 BATF2Q8N1L9 274 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 CD177Q8N6Q3 437 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-210ENST00000532935 ZDHHC22Q8N966 263 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 ZNRF1Q8ND25 227 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 DNAAF1Q8NEP3 725 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 OR13C3Q8NGS6 347 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 C8orf46Q8TAG6 207 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 HAVCR2Q8TDQ0 301 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 DMRTB1Q96MA1 342 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 ZNF48Q96MX3 618 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-210ENST00000532935 SOX21Q9Y651 276 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-210ENST00000532935 KPTNQ9Y664 436 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 TENM1Q9UKZ4 2725 aa12.68□□□□□ -0.38
CPSF1-210ENST00000532935 IGKV1-9A0A0C4DH69 117 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 TMEM212A6NML5 194 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 ZFPL1O95159 310 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 GNAO1P09471 354 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 CCDC159P0C7I6 412 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 ATF1P18846 271 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 PRDX2P32119 198 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 RBP2P50120 134 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 ETV1P50549 477 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 ATP1B3P54709 279 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 BPIFB3P59826 476 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 ERVK11-1P61568 191 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 PDCD1Q15116 288 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 KCTD21Q4G0X4 260 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 KIR3DL3Q8N743 410 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 TMEM185AQ8NFB2 350 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 OR5AK2Q8NH90 309 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 ELL3Q9HB65 397 aaPredicted RBP12.67□□□□□ -0.38
CPSF1-210ENST00000532935 MTCH1Q9NZJ7 389 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 ONECUT1Q9UBC0 465 aa12.67□□□□□ -0.38
CPSF1-210ENST00000532935 CENPVL3A0A0U1RRI6 287 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 PRKACBP22694 351 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 AZGP1P25311 298 aaKnown RBP12.66□□□□□ -0.38
CPSF1-210ENST00000532935 CEBPDP49716 269 aaPredicted RBP12.66□□□□□ -0.38
CPSF1-210ENST00000532935 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
CPSF1-210ENST00000532935 UBA52P62987 128 aaKnown RBP12.66□□□□□ -0.38
CPSF1-210ENST00000532935 RUSC1-AS1Q66K80 236 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 TMPRSS11AQ6ZMR5 421 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 SLC25A26Q70HW3 274 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 VMO1Q7Z5L0 202 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 ZNF561Q8N587 486 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 FAM216AQ8WUB2 273 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 LHX4Q969G2 390 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 SLAMF9Q96A28 289 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 SPSB1Q96BD6 273 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 CEP19Q96LK0 163 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 PDCD1LG2Q9BQ51 273 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 COMMD4Q9H0A8 199 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 OR14J1Q9UGF5 321 aa12.66□□□□□ -0.38
CPSF1-210ENST00000532935 DIMT1Q9UNQ2 313 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms