RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 RPL22L1Q6P5R6 122 aaKnown RBP13.92□□□□□ -0.18
HIF3A-211ENST00000528563 USP43Q70EL4 1123 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 BORCS8Q96FH0 119 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 DMRTB1Q96MA1 342 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 MTCH1Q9NZJ7 389 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 CNOT2Q9NZN8 540 aaKnown RBP13.92□□□□□ -0.18
HIF3A-211ENST00000528563 ZNF69Q9UC07 566 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 RFPL4AA6NLU0 287 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 RNF212BA8MTL3 300 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 RFPL4AL1F8VTS6 287 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 OGG1O15527 345 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 MT-ND2P03891 347 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 MMP9P14780 707 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 MYL12AP19105 171 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 FPR2P25090 351 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 PRDX2P32119 198 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 GABRA2P47869 451 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 RBP2P50120 134 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 ATP1B3P54709 279 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 AQP4P55087 323 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 CAV3P56539 151 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 CNN3Q15417 329 aaKnown RBP13.91□□□□□ -0.18
HIF3A-211ENST00000528563 PARP16Q8N5Y8 322 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 CD177Q8N6Q3 437 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 ZNRF1Q8ND25 227 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 OR52N1Q8NH53 320 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 ZNF418Q8TF45 676 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-211ENST00000528563 COMMD4Q9H0A8 199 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 CNTD2Q9H8S5 307 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 FKBP14Q9NWM8 211 aa13.91□□□□□ -0.18
HIF3A-211ENST00000528563 SIRT4Q9Y6E7 314 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-211ENST00000528563 NKX6-3A6NJ46 265 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 F8VVB4 439 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 F8VWA3 439 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 ALX3O95076 343 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 NXPH2O95156 264 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 VENTXO95231 258 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 PLATP00750 562 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 IGHV4-38-2P0DP08 117 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 AZGP1P25311 298 aaKnown RBP13.9□□□□□ -0.18
HIF3A-211ENST00000528563 MTCP1P56278 107 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 CDK5R1Q15078 307 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 KRTAP24-1Q3LI83 254 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 SLC25A26Q70HW3 274 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 BPIFB6Q8NFQ5 453 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 C8orf46Q8TAG6 207 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 GATAD2BQ8WXI9 593 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 C22orf15Q8WYQ4 148 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 RGP1Q92546 391 aaPredicted RBP13.9□□□□□ -0.18
HIF3A-211ENST00000528563 SPSB1Q96BD6 273 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 WDFY2Q96P53 400 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 SLC6A7Q99884 636 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 DCTN5Q9BTE1 182 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 SIRPDQ9H106 197 aa13.9□□□□□ -0.18
HIF3A-211ENST00000528563 CHCHD3Q9NX63 227 aaKnown RBP13.9□□□□□ -0.18
HIF3A-211ENST00000528563 SLC25A10Q9UBX3 287 aaPredicted RBP13.9□□□□□ -0.18
HIF3A-211ENST00000528563 LALBAP00709 142 aa13.89□□□□□ -0.19
HIF3A-211ENST00000528563 SFTPBP07988 381 aa13.89□□□□□ -0.19
HIF3A-211ENST00000528563 C21orf33P30042 268 aaPredicted RBP13.89□□□□□ -0.19
HIF3A-211ENST00000528563 ARF6P62330 175 aa13.89□□□□□ -0.19
HIF3A-211ENST00000528563 MED21Q13503 144 aa13.89□□□□□ -0.19
HIF3A-211ENST00000528563 SERPINA12Q8IW75 414 aa13.89□□□□□ -0.19
HIF3A-211ENST00000528563 BCL6BQ8N143 479 aaPredicted RBP13.89□□□□□ -0.19
HIF3A-211ENST00000528563 BPIFB2Q8N4F0 458 aa13.89□□□□□ -0.19
HIF3A-211ENST00000528563 OR5D14Q8NGL3 314 aa13.89□□□□□ -0.19
HIF3A-211ENST00000528563 CEP19Q96LK0 163 aa13.89□□□□□ -0.19
HIF3A-211ENST00000528563 TBX15Q96SF7 602 aa13.89□□□□□ -0.19
HIF3A-211ENST00000528563 ZCCHC4Q9H5U6 513 aa13.89□□□□□ -0.19
HIF3A-211ENST00000528563 TOX4O94842 621 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 HILS1P60008 231 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 PDZK1IP1Q13113 114 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 RIPK1Q13546 671 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 C6orf141Q5SZD1 244 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 CRIP3Q6Q6R5 217 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 C9orf139Q6ZV77 190 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 RNF144BQ7Z419 303 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 BATF2Q8N1L9 274 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 ZNF561Q8N587 486 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 OR13C9Q8NGT0 318 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 SLAMF9Q96A28 289 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 OPALINQ96PE5 141 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 PCGF1Q9BSM1 259 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 SUCNR1Q9BXA5 334 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 DHDHQ9UQ10 334 aa13.88□□□□□ -0.19
HIF3A-211ENST00000528563 IGHV3OR16-10A0A075B7F0 116 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 H0YHG0 523 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 RGS9O75916 674 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-211ENST00000528563 KNG1P01042 644 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 METTL11BQ5VVY1 283 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 DMKNQ6E0U4 476 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-211ENST00000528563 ZNF529Q6P280 563 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 LHFPL2Q6ZUX7 228 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 AHSA2Q719I0 299 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 MKXQ8IYA7 352 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 GPR148Q8TDV2 347 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 SEBOXQ9HB31 216 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-211ENST00000528563 KPTNQ9Y664 436 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 INMTO95050 263 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 NDUFB7P17568 137 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 NPBWR2P48146 333 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms