RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 NFYAP23511 347 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 CHATP28329 748 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 PTGER4P35408 488 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 SRSF7Q16629 238 aaKnown RBP eCLIP12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 LGALSLQ3ZCW2 172 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 HIKESHIQ53FT3 197 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 TMEM128Q5BJH2 165 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 TMEM211Q6ICI0 200 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 FBXW12Q6X9E4 464 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 Q6ZS92 163 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 LINC00596Q86U02 117 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 MDP1Q86V88 176 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 C1orf174Q8IYL3 243 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 CMSS1Q9BQ75 279 aaKnown RBP12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 PLSCR4Q9NRQ2 329 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 ST3GAL6Q9Y274 331 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 MUC3AQ02505 3323 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 IGKV1-12A0A0C4DH73 117 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 OR2AT4A6NND4 320 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 IGKV1D-12P01611 117 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 CBR1P16152 277 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 ZNF14P17017 642 aaPredicted RBP12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 IGHV1-2P23083 117 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 HOXC12P31275 282 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 RBM11P57052 281 aaKnown RBP12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 GABRA6Q16445 453 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 TAF9Q16594 264 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 DMRTC1Q5HYR2 192 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 NKAPLQ5M9Q1 402 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 C1QTNF12Q5T7M4 302 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 C6orf201Q7Z4U5 140 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 PEG10Q86TG7 708 aaKnown RBP12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 ZNF573Q86YE8 665 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 FBXL14Q8N1E6 418 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 C17orf78Q8N4C9 275 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 ZNF611Q8N823 705 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 CDH20Q9HBT6 801 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 OSGIN2Q9Y236 505 aa12.72□□□□□ -0.37
ECHDC1-220ENST00000528402 G3V3Q6 166 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 NGFP01138 241 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 CD8AP01732 235 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 GLAP06280 429 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 CCL2P13500 99 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 COX5AP20674 150 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 SDHBP21912 280 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 PER3P56645 1201 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 ARPC4P59998 168 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 FGF12P61328 243 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 SNRPD2P62316 118 aaKnown RBP12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 GNG3P63215 75 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 CYCSP99999 105 aaKnown RBP12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 IKZF1Q13422 519 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 MPV17LQ2QL34 196 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 ACSF3Q4G176 576 aaPredicted RBP12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 SIGIRRQ6IA17 410 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 SLC25A26Q70HW3 274 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 OR5M8Q8NGP6 311 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 SNIP1Q8TAD8 396 aaKnown RBP12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 MARCH1Q8TCQ1 289 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 OR5P3Q8WZ94 311 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 MRGPRFQ96AM1 343 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 PKIBQ9C010 78 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 EHFQ9NZC4 300 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 GPR160Q9UJ42 338 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 ANXA10Q9UJ72 324 aa12.71□□□□□ -0.37
ECHDC1-220ENST00000528402 RFPL4AA6NLU0 287 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 POM121CA8CG34 1229 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF732B4DXR9 585 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 RFPL4AL1F8VTS6 287 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 TRAPPC2LH3BP13 241 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 IFNA7P01567 189 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 HOXD4P09016 255 aaPredicted RBP12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF35P13682 527 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 WNT5AP41221 380 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 KIR2DL2P43627 348 aaPredicted RBP12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF81P51508 661 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 H2BFSP57053 126 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 SEC61A1P61619 476 aaKnown RBP12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 PPP1R1AQ13522 171 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 P2RY6Q15077 328 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 PLEKHN1Q494U1 663 aaPredicted RBP12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 OR10AD1Q8NGE0 317 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 LILRB4Q8NHJ6 448 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 FAAP24Q9BTP7 215 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 RIMS4Q9H426 269 aaPredicted RBP12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 SPACA1Q9HBV2 294 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 DECR2Q9NUI1 292 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF701Q9NV72 531 aaPredicted RBP12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 NECAP2Q9NVZ3 263 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 COMMD9Q9P000 198 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 AK3Q9UIJ7 227 aa12.71□□□□□ -0.38
ECHDC1-220ENST00000528402 MBD3L4A6NDZ8 208 aaPredicted RBP12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 MBD3L3A6NE82 208 aaPredicted RBP12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 MBD3L5A6NJ08 208 aaPredicted RBP12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 MCRIP1C9JLW8 97 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 L7N2F9 121 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 M0R233 179 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 GEMIN2O14893 280 aaKnown RBP12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 KLK10O43240 276 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 TOXO94900 526 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms