RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 DEFB108BQ8NET1 73 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 OR5T2Q8NGG2 359 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 OR4D6Q8NGJ1 314 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 OR5D18Q8NGL1 313 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 OR11L1Q8NGX0 322 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 ANGPTL6Q8NI99 470 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 ZNF671Q8TAW3 534 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 RAB1CQ92928 201 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 SLAMF9Q96A28 289 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 CYYR1Q96J86 154 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 PIMREGQ9BSJ6 248 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 CENPOQ9BU64 300 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 CNTD2Q9H8S5 307 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 IL36RNQ9UBH0 155 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 CTSZQ9UBR2 303 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 DUX4Q9UBX2 424 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 ACANP16112 2415 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 TRAV1-2A0A0B4J238 106 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 OOEPA6NGQ2 149 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 CEACAM18A8MTB9 384 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 KDM4BO94953 1096 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 PLATP00750 562 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 CALCBP10092 127 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 PSG2P11465 335 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 BCL3P20749 454 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 ZFP36P26651 326 aaKnown RBP8.98□□□□□ -0.97
NEDD8-205ENST00000527046 MDH2P40926 338 aaKnown RBP8.98□□□□□ -0.97
NEDD8-205ENST00000527046 PTGFRP43088 359 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 OR3A4PP47883 348 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 TMEM155Q4W5P6 130 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 HSD17B12Q53GQ0 312 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 DDI2Q5TDH0 399 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 STUMQ69YW2 141 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 C22orf42Q6IC83 251 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 SLC16A12Q6ZSM3 486 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 SAXO1Q8IYX7 474 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 PXT1Q8NFP0 134 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 OR51F2Q8NH61 342 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 DACT3Q96B18 629 aaPredicted RBP8.98□□□□□ -0.97
NEDD8-205ENST00000527046 SMR3AQ99954 134 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 FUNDC2Q9BWH2 189 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 MRPS26Q9BYN8 205 aaKnown RBP8.98□□□□□ -0.97
NEDD8-205ENST00000527046 NAA50Q9GZZ1 169 aaKnown RBP8.98□□□□□ -0.97
NEDD8-205ENST00000527046 NARFLQ9H6Q4 476 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 PATZ1Q9HBE1 687 aaKnown RBP8.98□□□□□ -0.97
NEDD8-205ENST00000527046 SNTG1Q9NSN8 517 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 RBFOX1Q9NWB1 397 aaKnown RBP8.98□□□□□ -0.97
NEDD8-205ENST00000527046 ZNF581Q9P0T4 197 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 METRNQ9UJH8 293 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 STUB1Q9UNE7 303 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 AK6Q9Y3D8 172 aaKnown RBP8.98□□□□□ -0.97
NEDD8-205ENST00000527046 MAB21L2Q9Y586 359 aa8.98□□□□□ -0.97
NEDD8-205ENST00000527046 CREBBPQ92793 2442 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 ZNF469Q96JG9 3925 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-205ENST00000527046 A0A1W2PP11 408 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 hCG_1807616A0A1W2PRN6 198 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 LRRC30A6NM36 301 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 KIAA1324LA8MWY0 1029 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-205ENST00000527046 CDRT1O95170 752 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 IGHV2-5P01817 119 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 GYPAP02724 150 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 HCKP08631 526 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 CLEC2LP0C7M8 214 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 SELLP14151 372 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 MUC1P15941 1255 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-205ENST00000527046 GLRA1P23415 457 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 MAPK3P27361 379 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-205ENST00000527046 ZNF93P35789 620 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-205ENST00000527046 POU3F4P49335 361 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 GMFBP60983 142 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 QRFPP83859 136 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 PAX2Q02962 417 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 ELP2Q6IA86 826 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 ZNF788Q6ZQV5 615 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 C1orf87Q8N0U7 546 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 ZSCAN4Q8NAM6 433 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-205ENST00000527046 THRSPQ92748 146 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 HPS1Q92902 700 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 CEP19Q96LK0 163 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 CHCHD6Q9BRQ6 235 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 SEBOXQ9HB31 216 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-205ENST00000527046 SMURF1Q9HCE7 757 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 HMG20AQ9NP66 347 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 RASL12Q9NYN1 266 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 KAAG1Q9UBP8 84 aa8.97□□□□□ -0.97
NEDD8-205ENST00000527046 MAP1AP78559 2803 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-205ENST00000527046 HIVEP1P15822 2718 aa8.96□□□□□ -0.97
NEDD8-205ENST00000527046 MALRD1Q5VYJ5 2156 aa8.96□□□□□ -0.97
NEDD8-205ENST00000527046 MEGF11A6BM72 1044 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 OR2AT4A6NND4 320 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 SLC22A1O15245 554 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 IGHV4-31P0DP07 118 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 TMEM225BP0DP42 221 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 IRF2P14316 349 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 CALRP27797 417 aaKnown RBP8.96□□□□□ -0.98
NEDD8-205ENST00000527046 CFPP27918 469 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 CEBPDP49716 269 aaPredicted RBP8.96□□□□□ -0.98
NEDD8-205ENST00000527046 OR10A3P58181 314 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 PPP3R1P63098 170 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 CTF1Q16619 201 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms