RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 SOX2P48431 317 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 IL13RA1P78552 427 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 LRRC10Q5BKY1 277 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 LYPD2Q6UXB3 125 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 ZNF841Q6ZN19 808 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 ACP7Q6ZNF0 438 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 ANGPTL5Q86XS5 388 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 CALHM1Q8IU99 346 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 SAXO1Q8IYX7 474 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 ZSCAN4Q8NAM6 433 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 ANGPTL6Q8NI99 470 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 RGP1Q92546 391 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 CEP19Q96LK0 163 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 WDR13Q9H1Z4 485 aa13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 LSM2Q9Y333 95 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-214ENST00000523777 IGKV1-27A0A075B6S5 117 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 LOC105371242A0A075B767 164 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 KIAA1324LA8MWY0 1029 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 PHF1O43189 567 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 SYNGR1O43759 233 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 ENSAO43768 121 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 KNG1P01042 644 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 GMFBP60983 142 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 ERVK11-1P61568 191 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 SEC61A1P61619 476 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 PDZK1IP1Q13113 114 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 TRAM1Q15629 374 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 TBCEQ15813 527 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 ZNF529Q6P280 563 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 ZNF788Q6ZQV5 615 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 SLC25A26Q70HW3 274 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 SVOPQ8N4V2 548 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 ZFP41Q8N8Y5 198 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 RAB40AQ8WXH6 277 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 UFD1Q92890 307 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 MRI1Q9BV20 369 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 HES4Q9HCC6 221 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 TMEM138Q9NPI0 162 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 GLS2Q9UI32 602 aa13.46□□□□□ -0.25
TRAPPC9-214ENST00000523777 ZNF879B4DU55 563 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 DVL1O14640 695 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 SIGLEC5O15389 551 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 GPX5O75715 221 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 FAM157CP0CG43 387 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 PSG2P11465 335 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 PSMA1P25786 263 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 GABRA2P47869 451 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 POU3F4P49335 361 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 BMXP51813 675 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 MLLT11Q13015 90 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 KISS1Q15726 138 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 ZNF561Q8N587 486 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 PNLDC1Q8NA58 520 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 OR5M11Q96RB7 305 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 CCL13Q99616 98 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 C7orf69Q9H7B7 122 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 SEBOXQ9HB31 216 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 SNTG1Q9NSN8 517 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 CTSZQ9UBR2 303 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 FOXJ3Q9UPW0 622 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 INSIG2Q9Y5U4 225 aa13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 SONP18583 2426 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 FN1P02751 2386 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-214ENST00000523777 IGHV2-70DA0A0C4DH43 119 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 KIR2DS1A0A191URI9 304 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 PNMA8CA0A1B0GUJ8 204 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 IFNA2P01563 188 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 PPIAL4GP0DN37 164 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 SRD5A1P18405 259 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 FSTP19883 344 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 BDKRB2P30411 391 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 SRP14P37108 136 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 CAV3P56539 151 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 RPS11P62280 158 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 HOXA4Q00056 320 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 ZNF367Q7RTV3 350 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 CDH26Q8IXH8 852 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 OR5T2Q8NGG2 359 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 SGCDQ92629 289 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 SLAMF9Q96A28 289 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 SDSLQ96GA7 329 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 GPER1Q99527 375 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 NUDT16L1Q9BRJ7 211 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 TAS2R4Q9NYW5 299 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 MTCH1Q9NZJ7 389 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 LRRC42Q9Y546 428 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 ARHGAP32A7KAX9 2087 aa13.44□□□□□ -0.26
TRAPPC9-214ENST00000523777 IGKV1D-17A0A075B6S4 117 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 TRBV5-7A0A0A0MS05 114 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 MEGF11A6BM72 1044 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 RFPL4AA6NLU0 287 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 RFPL4AL1F8VTS6 287 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 PLATP00750 562 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 HSMCR30P0CW71 290 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 PRDX2P32119 198 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 PAX8Q06710 450 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 TPBGQ13641 420 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 DOC2BQ14184 412 aa13.43□□□□□ -0.26
TRAPPC9-214ENST00000523777 SPIN3Q5JUX0 258 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms