RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 MTCP1P56278 107 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 SNRPEP62304 92 aaKnown RBP14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 SWI5Q1ZZU3 235 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 MIDNQ504T8 468 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 RTL6Q6ICC9 239 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 BRICD5Q6PL45 260 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 FOXL2NBQ6ZUU3 175 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 C20orf196Q8IYI0 205 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 TMEM123Q8N131 208 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 EGLN1Q9GZT9 426 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 IFT22Q9H7X7 185 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 PLEK2Q9NYT0 353 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 BCAT2O15382 392 aaPredicted RBP14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 XRCC2O43543 280 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 SNCAP37840 140 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 ZNF133P52736 654 aaPredicted RBP14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 TMEM187Q14656 261 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 TGIF1Q15583 401 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 LYZL2Q7Z4W2 148 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 HIST1H2BAQ96A08 127 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 NAA11Q9BSU3 229 aaPredicted RBP14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 ARV1Q9H2C2 271 aa14.43□□□□□ -0.1
PCDHGA11-202ENST00000518882 IFNA4P05014 189 aa14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 ACAA1P09110 424 aaPredicted RBP14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 AFF3P51826 1226 aaKnown RBP14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 CDCP2Q5VXM1 449 aa14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 GUSBP11Q6P575 273 aa14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 C15orf54Q8N8G6 183 aa14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 GNRHR2Q96P88 292 aa14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 RPS10P5Q9NQ39 176 aa14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 NXT1Q9UKK6 140 aaKnown RBP14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 ZDHHC8Q9ULC8 765 aa14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 FRYLO94915 3013 aa14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 PI4KAP42356 2102 aa14.42□□□□□ -0.1
PCDHGA11-202ENST00000518882 FAM230AA0A1W2PPH8 454 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 A0A1W2PQM1 296 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 FAM221AA4D161 298 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 ZNF850A8MQ14 1090 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 LINC01387J3KSC0 135 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 DHHO43323 396 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 C1QL1O75973 258 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 TSPAN15O95858 294 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 PAX6P26367 422 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 FXYD4P59646 89 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 TMEM156Q8N614 296 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 IP6K3Q96PC2 410 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 NAA60Q9H7X0 242 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 PLEKHA2Q9HB19 425 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 KPTNQ9Y664 436 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 TOX3O15405 576 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 GDF9O60383 454 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 DANCRP0C864 163 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 ZNF616Q08AN1 781 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 AWAT1Q58HT5 328 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 PLXDC2Q6UX71 529 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 NAXEQ8NCW5 288 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 RTN4IP1Q8WWV3 396 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 REEP6Q96HR9 211 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 SH3BGRL3Q9H299 93 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 FAM212BQ9NTI7 297 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 RARRES3Q9UL19 164 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 EDARQ9UNE0 448 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 FREM2Q5SZK8 3169 aa14.41□□□□□ -0.1
PCDHGA11-202ENST00000518882 E5RGE8 158 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 NPIPA2E9PIF3 369 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 NPIPA3F8WFD2 350 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 G3V3Y1 287 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 APOC1P02654 83 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 ZNF728P0DKX0 622 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 ZNF44P15621 663 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 PTAFRP25105 342 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 RAB5BP61020 215 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 COL19A1Q14993 1142 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 RSU1Q15404 277 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 PHLDA2Q53GA4 152 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 OR52M1Q8NGK5 317 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 ISOC2Q96AB3 205 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 C10orf35Q96D05 121 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 METTL9Q9H1A3 318 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 NECAP2Q9NVZ3 263 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 FOXD3Q9UJU5 478 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 NSG2Q9Y328 171 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 IGHV5-10-1A0A0J9YXX1 117 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 MED19A0JLT2 244 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 NR2C1P13056 603 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 DAOP14920 347 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 GUK1Q16774 197 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 PIGYQ3MUY2 71 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 ZIC4Q8N9L1 334 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 HPSE2Q8WWQ2 592 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 DNASE2BQ8WZ79 361 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 GALNT14Q96FL9 552 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 C20orf24Q9BUV8 137 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 ATPIF1Q9UII2 106 aa14.4□□□□□ -0.1
PCDHGA11-202ENST00000518882 CCDC187A0A096LP49 1063 aa14.39□□□□□ -0.11
PCDHGA11-202ENST00000518882 A0A1W2PPE3 182 aa14.39□□□□□ -0.11
PCDHGA11-202ENST00000518882 SNRNP70P08621 437 aaKnown RBP14.39□□□□□ -0.11
PCDHGA11-202ENST00000518882 CBR1P16152 277 aa14.39□□□□□ -0.11
PCDHGA11-202ENST00000518882 CRYGSP22914 178 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms