RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 TRAPPC2LH3BP13 241 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 PIN1P1O15428 100 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 ADAM20O43506 726 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 FOXH1O75593 365 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 ARL6IP5O75915 188 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 NXPH2O95156 264 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 LY6G6DO95868 133 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 GYPAP02724 150 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 MSMBP08118 114 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 TMEM225BP0DP42 221 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 ZNF93P35789 620 aaPredicted RBP9.94□□□□□ -0.82
SNF8-215ENST00000515572 NPY4RP50391 375 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 RPS25P62851 125 aaKnown RBP9.94□□□□□ -0.82
SNF8-215ENST00000515572 HOXA4Q00056 320 aaPredicted RBP9.94□□□□□ -0.82
SNF8-215ENST00000515572 KRTAP1-1Q07627 177 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 SSX1Q16384 188 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 SYT6Q5T7P8 510 aaPredicted RBP9.94□□□□□ -0.82
SNF8-215ENST00000515572 ATPAF1Q5TC12 328 aaPredicted RBP9.94□□□□□ -0.82
SNF8-215ENST00000515572 DDI2Q5TDH0 399 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 FIP1L1Q6UN15 594 aaKnown RBP9.94□□□□□ -0.82
SNF8-215ENST00000515572 ACP7Q6ZNF0 438 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 SLC36A1Q7Z2H8 476 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 CDH26Q8IXH8 852 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 NKAIN3Q8N8D7 197 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 PNLDC1Q8NA58 520 aaKnown RBP9.94□□□□□ -0.82
SNF8-215ENST00000515572 OR52N4Q8NGI2 321 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 OR51F2Q8NH61 342 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 SLAMF9Q96A28 289 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 RFT1Q96AA3 541 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 MSI2Q96DH6 328 aaKnown RBP9.94□□□□□ -0.82
SNF8-215ENST00000515572 SPACA5Q96QH8 159 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 GPER1Q99527 375 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 SMR3AQ99954 134 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 SLITRK2Q9H156 845 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 TCF7L1Q9HCS4 588 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 MTCH1Q9NZJ7 389 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 ABCA2Q9BZC7 2435 aa9.94□□□□□ -0.82
SNF8-215ENST00000515572 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.94□□□□□ -0.822e-7■■■□□ 18.6
SNF8-215ENST00000515572 ABCA1O95477 2261 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 TRAV20A0A0B4J274 112 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 NKX6-3A6NJ46 265 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 A8MXK9 166 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 TMPRSS2O15393 492 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 KDM4BO94953 1096 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 INMTO95050 263 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 KNG1P01042 644 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 TGFAP01135 160 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 UCHL1P09936 223 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 ZNF16P17020 682 aaPredicted RBP9.93□□□□□ -0.82
SNF8-215ENST00000515572 PITPNBP48739 271 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 BMXP51813 675 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 DVL1P1P54792 670 aaPredicted RBP9.93□□□□□ -0.82
SNF8-215ENST00000515572 ZP1P60852 638 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 GMFBP60983 142 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 GNB2P62879 340 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 FABP5Q01469 135 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 INSL4Q14641 139 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 NEDD8Q15843 81 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 C11orf91Q3C1V1 193 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 HSD17B12Q53GQ0 312 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 FAM166AQ6J272 317 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 CRIP3Q6Q6R5 217 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 CD200R1LQ6Q8B3 271 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 LYPD2Q6UXB3 125 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 TMEM91Q6ZNR0 172 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 SATL1Q86VE3 508 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 GLCCI1Q86VQ1 547 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 PXT1Q8NFP0 134 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 OR5D18Q8NGL1 313 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 ANGPTL6Q8NI99 470 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 ORAI1Q96D31 301 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 MED30Q96HR3 178 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 ZNF488Q96MN9 340 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 SSBP3Q9BWW4 388 aaPredicted RBP9.93□□□□□ -0.82
SNF8-215ENST00000515572 SMURF1Q9HCE7 757 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 SNTG1Q9NSN8 517 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 CLN8Q9UBY8 286 aa9.93□□□□□ -0.82
SNF8-215ENST00000515572 POLR3KQ9Y2Y1 108 aaPredicted RBP9.93□□□□□ -0.82
SNF8-215ENST00000515572 PPIAL4CA0A0B4J2A2 164 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 TRDV1A0A1B0GX56 115 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 TRIM64CA6NLI5 447 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 GABRPO00591 440 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 SPRY1O43609 319 aaPredicted RBP9.92□□□□□ -0.82
SNF8-215ENST00000515572 ANGPTL7O43827 346 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 MAS1P04201 325 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 PSG2P11465 335 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 SRMP19623 302 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 GATA3P23771 443 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 PTGFRP43088 359 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 IL13RA1P78552 427 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 SPIN3Q5JUX0 258 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 FAM27D1Q5T7N8 215 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 ZNF788Q6ZQV5 615 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 FAM58AQ8N1B3 248 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 OR5T2Q8NGG2 359 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 TNFAIP8L1Q8WVP5 186 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 EMG1Q92979 244 aaKnown RBP9.92□□□□□ -0.82
SNF8-215ENST00000515572 MUL1Q969V5 352 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 FOXRED1Q96CU9 486 aaPredicted RBP9.92□□□□□ -0.82
SNF8-215ENST00000515572 SEH1LQ96EE3 360 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 1226.8 ms