RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 IGFBP3P17936 291 aaPredicted RBP8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 FSTP19883 344 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 BCL3P20749 454 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 PRKACBP22694 351 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 GLRA1P23415 457 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 BDKRB2P30411 391 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 GABRA5P31644 462 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 TGFBR2P37173 567 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 MDH2P40926 338 aaKnown RBP8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 OR3A4PP47883 348 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 NPBWR2P48146 333 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 ATP1B3P54709 279 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 ZP1P60852 638 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNF404Q494X3 552 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 FAM76BQ5HYJ3 339 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNF529Q6P280 563 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 FAM90A1Q86YD7 464 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 C1orf87Q8N0U7 546 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 FGFRL1Q8N441 504 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 POC1AQ8NBT0 407 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 OR5D14Q8NGL3 314 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 FCGR1BQ92637 280 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 ITFG2Q969R8 447 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 TECTBQ96PL2 329 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 GPER1Q99527 375 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 TMEM246Q9BRR3 403 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNF665Q9H7R5 613 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 TMEM165Q9HC07 324 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 RBFOX1Q9NWB1 397 aaKnown RBP8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 ACANP16112 2415 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 SMIM30A4D0T7 59 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 IFNL4K9M1U5 179 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 SC5DO75845 299 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 NXPH2O95156 264 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 LHBP01229 141 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 IGHV2-5P01817 119 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 INHBBP09529 407 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 IGHV4-31P0DP07 118 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 RPS2P15880 293 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 ADRA2CP18825 462 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 MPZP25189 248 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 LMO4P61968 165 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 KRTAP1-1Q07627 177 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 LOXL1Q08397 574 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 GPR50Q13585 617 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 KISS1Q15726 138 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 TMEM249Q2WGJ8 235 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 HSD17B12Q53GQ0 312 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 SYT6Q5T7P8 510 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 UNQ9370/PRO34162Q6UXP9 181 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 Q71RC1 249 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 C1QL2Q7Z5L3 287 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 LRRC28Q86X40 367 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 MS4A15Q8N5U1 240 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 FAM216BQ8N7L0 139 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 OR10K1Q8NGX5 313 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 OR10Z1Q8NGY1 313 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 TNFAIP8L1Q8WVP5 186 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 C18orf12Q96KH6 178 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 NR1H4Q96RI1 486 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 CCL13Q99616 98 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 NRIP2Q9BQI9 281 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 PKIBQ9C010 78 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 OR51E2Q9H255 320 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 GSX1Q9H4S2 264 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 RNF167Q9H6Y7 350 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 ELL3Q9HB65 397 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 EXOSC4Q9NPD3 245 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 MTCH1Q9NZJ7 389 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 CTSZQ9UBR2 303 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 CKLFQ9UBR5 152 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 DNAJB11Q9UBS4 358 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 POLDIP2Q9Y2S7 368 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 F8P00451 2351 aa8.19□□□□□ -1.1
TOPBP1-209ENST00000513818 A0A1W2PP11 408 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 SHISA3A0PJX4 238 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 TRIM64CA6NLI5 447 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 MAGEB3O15480 346 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 PHF1O43189 567 aaPredicted RBP8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 ADAM20O43506 726 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 FCN3O75636 299 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 GPX5O75715 221 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 CDRT1O95170 752 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 UCHL1P09936 223 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 TMEM225BP0DP42 221 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 CD36P16671 472 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 AMY2BP19961 511 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 GADD45AP24522 165 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 MAPK3P27361 379 aaPredicted RBP8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 CALRP27797 417 aaKnown RBP8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 DUSP1P28562 367 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNF93P35789 620 aaPredicted RBP8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 GABRA2P47869 451 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 PRR20EP86478 221 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 PRR20CP86479 221 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 PRR20DP86480 221 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 PRR20BP86481 221 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 PRR20AP86496 221 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 IL24Q13007 206 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms