RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RP2O75695 350 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 TPPPO94811 219 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 PNPP00491 289 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 IGHG1P01857 330 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 ZNF14P17017 642 aaPredicted RBP5.36□□□□□ -1.55
VIM-207ENST00000495528 ZNF3P17036 446 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 PAICSP22234 425 aaKnown RBP5.36□□□□□ -1.55
VIM-207ENST00000495528 GLRXP35754 106 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 MAGEB1P43366 347 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 CSNK1A1P48729 337 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 SNRPGP62308 76 aaKnown RBP5.36□□□□□ -1.55
VIM-207ENST00000495528 FMODQ06828 376 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 SCGB2A2Q13296 93 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 APOFQ13790 326 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 SGCAQ16586 387 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 ALKBH6Q3KRA9 238 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 THEM4Q5T1C6 240 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 AVPI1Q5T686 147 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 FAM205BPQ63HN1 556 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 SLC25A47Q6Q0C1 308 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 CFAP77Q6ZQR2 320 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 CCDC36Q8IYA8 594 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 C20orf196Q8IYI0 205 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 TMEM123Q8N131 208 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 OR6V1Q8N148 313 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 ZDHHC22Q8N966 263 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 BPIFB6Q8NFQ5 453 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 TMEM54Q969K7 222 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 MCHR2Q969V1 340 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 LRR1Q96L50 414 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 Q96MT0 163 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 ZNF582Q96NG8 517 aaPredicted RBP5.36□□□□□ -1.55
VIM-207ENST00000495528 TEAD3Q99594 435 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 HCAR1Q9BXC0 346 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 MRPL13Q9BYD1 178 aaKnown RBP5.36□□□□□ -1.55
VIM-207ENST00000495528 PRRG3Q9BZD7 231 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 SYT4Q9H2B2 425 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 ESM1Q9NQ30 184 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 GLTPQ9NZD2 209 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 DNAJC27Q9NZQ0 273 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 HSPE1-MOB4S4R3N1 261 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 IGKV1D-43A0A0B4J1Z2 117 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 TVP23AA6NH52 213 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 DCTN6O00399 190 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 AHCYL1O43865 530 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 KHDRBS3O75525 346 aaKnown RBP5.35□□□□□ -1.55
VIM-207ENST00000495528 WBP4O75554 376 aaKnown RBP5.35□□□□□ -1.55
VIM-207ENST00000495528 MPZL1O95297 269 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 CLPTM1O96005 669 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 PATE4P0C8F1 98 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 PGA4P0DJD7 388 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 PGA3P0DJD8 388 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 CTLA4P16410 223 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 SPI1P17947 270 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 ADRA2CP18825 462 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 CRABP1P29762 137 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 ATP6V1E1P36543 226 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 GUCA1AP43080 201 aaPredicted RBP5.35□□□□□ -1.55
VIM-207ENST00000495528 HCCSP53701 268 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 MRPS11P82912 194 aaKnown RBP5.35□□□□□ -1.55
VIM-207ENST00000495528 GSG1Q2KHT4 349 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 PDLIM3Q53GG5 364 aaPredicted RBP5.35□□□□□ -1.55
VIM-207ENST00000495528 SLC25A30Q5SVS4 291 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 AADACL4Q5VUY2 407 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 MEDAGQ5VYS4 303 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 OTPQ5XKR4 325 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 LAIR2Q6ISS4 152 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 HDDC2Q7Z4H3 204 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 ADCK1Q86TW2 530 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 PROKR2Q8NFJ6 384 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 OR2T4Q8NH00 348 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 FGFBP3Q8TAT2 258 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 APH1BQ8WW43 257 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 C22orf15Q8WYQ4 148 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 GGHQ92820 318 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 SLC6A7Q99884 636 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 ALG12Q9BV10 488 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 SUCNR1Q9BXA5 334 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 ANKRD60Q9BZ19 345 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 NMNAT2Q9BZQ4 307 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 GHITMQ9H3K2 345 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 ZNF665Q9H7R5 613 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 ZNF696Q9H7X3 374 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 B3GAT2Q9NPZ5 323 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 SCN3BQ9NY72 215 aa5.35□□□□□ -1.55
VIM-207ENST00000495528 TRRAPQ9Y4A5 3859 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 A0A1W2PPW3 197 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 CENPBD1B2RD01 187 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 ZNF593O00488 134 aaPredicted RBP5.34□□□□□ -1.55
VIM-207ENST00000495528 XPNPEP2O43895 674 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 GLCEO94923 617 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 MRPL3P09001 348 aaKnown RBP5.34□□□□□ -1.55
VIM-207ENST00000495528 B4GALT1P15291 398 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 ZNF823P16415 610 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 SLC2A5P22732 501 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 SLC25A1P53007 311 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 CD81P60033 236 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 UBA52P62987 128 aaKnown RBP5.34□□□□□ -1.55
VIM-207ENST00000495528 CSNK2BP67870 215 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 CCL8P80075 99 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms