RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MTCH1Q9NZJ7 389 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 SLC25A10Q9UBX3 287 aaPredicted RBP13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 HSPE1-MOB4S4R3N1 261 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 NKX6-3A6NJ46 265 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 TOX4O94842 621 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 ATF1P18846 271 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 PRDX2P32119 198 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 CAPGP40121 348 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 GABRA2P47869 451 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 GTF2A1P52655 376 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 MRPL28Q13084 256 aaKnown RBP13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 IL18R1Q13478 541 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 SMIM21Q3B7S5 101 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 XAF1Q6GPH4 301 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 SETD9Q8NE22 299 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 C1orf147Q96MC9 270 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 MS4A7Q9GZW8 240 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 KPTNQ9Y664 436 aa13.14□□□□□ -0.31
CTDSP1-209ENST00000488627 CENPVL3A0A0U1RRI6 287 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 NXPH2O95156 264 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 GBX2P52951 348 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 BPIFB3P59826 476 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 OR2G6Q5TZ20 316 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 CRIP3Q6Q6R5 217 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 RNF144BQ7Z419 303 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 BATF2Q8N1L9 274 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 Q8N7P7 452 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 ZNF676Q8N7Q3 588 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 RPS4Y2Q8TD47 263 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 FAM216AQ8WUB2 273 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 NRG4Q8WWG1 115 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 TFAP2CQ92754 450 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 GGHQ92820 318 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 BORCS8Q96FH0 119 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 JMJD8Q96S16 334 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 PDCD1LG2Q9BQ51 273 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 PRDM13Q9H4Q3 707 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 ELL3Q9HB65 397 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 CLEC2DQ9UHP7 191 aa13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 DIMT1Q9UNQ2 313 aaKnown RBP13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 CAB39Q9Y376 341 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-209ENST00000488627 TMEM212A6NML5 194 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 MT-ND2P03891 347 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 PRKACBP22694 351 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 CEBPDP49716 269 aaPredicted RBP13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 UBA52P62987 128 aaKnown RBP13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 SLC34A1Q06495 639 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 CNN3Q15417 329 aaKnown RBP13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 METTL11BQ5VVY1 283 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 RUSC1-AS1Q66K80 236 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 SLC25A26Q70HW3 274 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 KIR3DL3Q8N743 410 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 ZNF485Q8NCK3 441 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 OR13C3Q8NGS6 347 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 OR5AK2Q8NH90 309 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 HAVCR2Q8TDQ0 301 aa13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 RGP1Q92546 391 aaPredicted RBP13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 SIRT4Q9Y6E7 314 aaPredicted RBP13.12□□□□□ -0.31
CTDSP1-209ENST00000488627 IRGMA1A4Y4 181 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 TRIM77I1YAP6 450 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 ALX3O95076 343 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 KNG1P01042 644 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 CCDC159P0C7I6 412 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 ZNF20P17024 532 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 NDUFB7P17568 137 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 AZGP1P25311 298 aaKnown RBP13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 RBP2P50120 134 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 ATP1B3P54709 279 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 MTCP1P56278 107 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 PDCD1Q15116 288 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 DEFB112Q30KQ8 113 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 CCDC58Q4VC31 144 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 GPR157Q5UAW9 335 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 C1orf122Q6ZSJ8 110 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 C8orf59Q8N0T1 100 aaPredicted RBP13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 ZNF561Q8N587 486 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 PARP16Q8N5Y8 322 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 TMEM185AQ8NFB2 350 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 H1FXQ92522 213 aaKnown RBP13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 TNFRSF14Q92956 283 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 SLAMF9Q96A28 289 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 SPSB1Q96BD6 273 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 TMEM80Q96HE8 168 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 CEP19Q96LK0 163 aa13.11□□□□□ -0.31
CTDSP1-209ENST00000488627 IGHV1-69DA0A0B4J2H0 117 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 TRBV2A0A0J9YWF9 115 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 MDFIC2A0A1B0GVS7 189 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 OGG1O15527 345 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 LALBAP00709 142 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 IGHV1-69P01742 117 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 RPSAP08865 295 aaKnown RBP13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 PRTN3P24158 256 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 NPBWR2P48146 333 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 ST3GAL4Q11206 333 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 PDZK1IP1Q13113 114 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 CDK5R1Q15078 307 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 ASPHD2Q6ICH7 369 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 RPL22L1Q6P5R6 122 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms