RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 TMEM203Q969S6 136 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 DERL3Q96Q80 235 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 OR14A2Q96R54 314 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 UQCC2Q9BRT2 126 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 METTL9Q9H1A3 318 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 NARFLQ9H6Q4 476 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF696Q9H7X3 374 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 ELL3Q9HB65 397 aaPredicted RBP6.94□□□□□ -1.3
SF3A1-208ENST00000485618 PATZ1Q9HBE1 687 aaKnown RBP6.94□□□□□ -1.3
SF3A1-208ENST00000485618 SNTG1Q9NSN8 517 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 TAS2R4Q9NYW5 299 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 NLKQ9UBE8 527 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 GHRLQ9UBU3 117 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 CLN8Q9UBY8 286 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 OR5V1Q9UGF6 321 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 SSR3Q9UNL2 185 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 TLN2Q9Y4G6 2542 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 CSPG4Q6UVK1 2322 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 ZANQ9Y493 2812 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 CHD3Q12873 2000 aaKnown RBP6.93□□□□□ -1.3
SF3A1-208ENST00000485618 NSD1Q96L73 2696 aaPredicted RBP6.93□□□□□ -1.3
SF3A1-208ENST00000485618 A0A1W2PPH5 198 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 OR2AT4A6NND4 320 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 CEACAM18A8MTB9 384 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 SH2D1BO14796 132 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 TMPRSS2O15393 492 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 AKR7A2O43488 359 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 ADAM20O43506 726 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 LMX1BO60663 402 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 PLATP00750 562 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 KNG1P01042 644 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 TGFAP01135 160 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 IGHV2-5P01817 119 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 CSTBP04080 98 aaKnown RBP6.93□□□□□ -1.3
SF3A1-208ENST00000485618 LIPFP07098 398 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 MSMBP08118 114 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 CHRM2P08172 466 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 WNT2P09544 360 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 UBBP0CG47 229 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 PGA5P0DJD9 388 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 SRMP19623 302 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 PTGFRP43088 359 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 GABRA2P47869 451 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 PITPNBP48739 271 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 POU3F4P49335 361 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 RPS11P62280 158 aaKnown RBP eCLIP6.93□□□□□ -1.3
SF3A1-208ENST00000485618 GNB2P62879 340 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 RSU1Q15404 277 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 FAM189A2Q15884 450 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 SPRNQ5BIV9 151 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 ATPAF1Q5TC12 328 aaPredicted RBP6.93□□□□□ -1.3
SF3A1-208ENST00000485618 DDI2Q5TDH0 399 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 SFRP4Q6FHJ7 346 aaPredicted RBP6.93□□□□□ -1.3
SF3A1-208ENST00000485618 FAM166AQ6J272 317 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF529Q6P280 563 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 BTNL3Q6UXE8 466 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 UNQ9370/PRO34162Q6UXP9 181 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 GDPGP1Q6ZNW5 385 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 JAGN1Q8N5M9 183 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 GCSAMQ8N6F7 178 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 PXT1Q8NFP0 134 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 OR5D13Q8NGL4 314 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 TNFAIP8L1Q8WVP5 186 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 DMRTB1Q96MA1 342 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 NRIP2Q9BQI9 281 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 TMEM246Q9BRR3 403 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 FAM192AQ9GZU8 254 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 SMURF1Q9HCE7 757 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 NOX4Q9NPH5 578 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 NDUFB11Q9NX14 153 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 KAAG1Q9UBP8 84 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 KCNS2Q9ULS6 477 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 HIVEP2P31629 2446 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 VPS13CQ709C8 3753 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 ABCA1O95477 2261 aa6.93□□□□□ -1.3
SF3A1-208ENST00000485618 PPIAL4CA0A0B4J2A2 164 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 IGKV1-9A0A0C4DH69 117 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 A0A0G2JMP0 313 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 A0A0X1KG70 313 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 TRDV1A0A1B0GX56 115 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 A0A1W2PPK0 400 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 FUOMA2VDF0 154 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 MAGEA13PA6NCF6 341 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 J3QLI3 93 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 SYNGR1O43759 233 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 CD5LO43866 347 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 KDM4BO94953 1096 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF205O95201 554 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 GYPAP02724 150 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 UCHL1P09936 223 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 PRDX2P32119 198 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 CD80P33681 288 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 MTNR1BP49286 362 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 DVL1P1P54792 670 aaPredicted RBP6.92□□□□□ -1.3
SF3A1-208ENST00000485618 GMFBP60983 142 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 LMO4P61968 165 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 IL13RA1P78552 427 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 NEDD8Q15843 81 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 SPIN3Q5JUX0 258 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 SYT6Q5T7P8 510 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms