RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 CCNOP22674 350 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 IVDP26440 423 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 IL12BP29460 328 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 CD40LGP29965 261 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 PSMC5P62195 406 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 PRR3P79522 188 aaKnown RBP4.31□□□□□ -1.72
UBR3-210ENST00000484596 PMS2P3Q13401 168 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 GINS1Q14691 196 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 GCSAMLQ5JQS6 135 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 CYB5R2Q6BCY4 276 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 ARL9Q6T311 187 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 PLET1Q6UQ28 207 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 FBXW12Q6X9E4 464 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 RBM45Q8IUH3 476 aaKnown RBP4.31□□□□□ -1.72
UBR3-210ENST00000484596 ST13P4Q8IZP2 240 aaPredicted RBP4.31□□□□□ -1.72
UBR3-210ENST00000484596 OR10G4Q8NGN3 311 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 ZFP90Q8TF47 636 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 TFGQ92734 400 aaPredicted RBP4.31□□□□□ -1.72
UBR3-210ENST00000484596 NTAN1Q96AB6 310 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 CHMP6Q96FZ7 201 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 RNF145Q96MT1 663 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 SCGB3A2Q96PL1 93 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 TAAR1Q96RJ0 339 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 AGMATQ9BSE5 352 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 API5Q9BZZ5 524 aaKnown RBP4.31□□□□□ -1.72
UBR3-210ENST00000484596 ARMC7Q9H6L4 198 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 CSNK1G1Q9HCP0 422 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 MTFP1Q9UDX5 166 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 ZNF229Q9UJW7 825 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 NEU3Q9UQ49 428 aa4.31□□□□□ -1.72
UBR3-210ENST00000484596 PRRC2BQ5JSZ5 2229 aaKnown RBP4.31□□□□□ -1.72
UBR3-210ENST00000484596 ZBED9Q6R2W3 1325 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 GOLGA8IPA6NC78 632 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 GABARAPO95166 117 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 GABRG2P18507 467 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 RAB3AP20336 220 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 UBE2AP49459 152 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 LHX2P50458 406 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 P2RX1P51575 399 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 ZNF136P52737 540 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 UBE2G2P60604 165 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 SHHQ15465 462 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 SAPCD1Q5SSQ6 148 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 METTL21CQ5VZV1 264 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 NCCRP1Q6ZVX7 275 aaPredicted RBP4.3□□□□□ -1.72
UBR3-210ENST00000484596 CYB561A3Q8NBI2 242 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 OR4D6Q8NGJ1 314 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 RNF170Q96K19 258 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 GOLPH3Q9H4A6 298 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 EDA2RQ9HAV5 297 aa4.3□□□□□ -1.72
UBR3-210ENST00000484596 ZNF331Q9NQX6 463 aaPredicted RBP4.3□□□□□ -1.72
UBR3-210ENST00000484596 IGLV11-55A0A075B6I3 123 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 IGKV6D-21A0A0A0MT36 114 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 IGHV3-74A0A0B4J1X5 117 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 IGHV3-64DA0A0J9YX35 117 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 GOLGA8MH3BSY2 632 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 COCHO43405 550 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 ENTPD5O75356 428 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 CD3GP09693 182 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 OR8U9P0C7N5 309 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 PGA4P0DJD7 388 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 PGA3P0DJD8 388 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 PSMB6P28072 239 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 PFN2P35080 140 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 HCAR3P49019 387 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 CDC34P49427 236 aaPredicted RBP4.29□□□□□ -1.72
UBR3-210ENST00000484596 AP1S2P56377 157 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 UBE2NP61088 152 aaKnown RBP4.29□□□□□ -1.72
UBR3-210ENST00000484596 VBP1P61758 197 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 RPS23P62266 143 aaKnown RBP4.29□□□□□ -1.72
UBR3-210ENST00000484596 STX3Q13277 289 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 DGCR6Q14129 220 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 RGNQ15493 299 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 C18orf21Q32NC0 220 aaPredicted RBP4.29□□□□□ -1.72
UBR3-210ENST00000484596 PRSS58Q8IYP2 241 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 METTL13Q8N6R0 699 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 Q8N9L7 120 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 C11orf72Q8NBR9 251 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 NOXO1Q8NFA2 376 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 OR8U1Q8NH10 309 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 OR8D1Q8WZ84 308 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 RCN3Q96D15 328 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 SGTBQ96EQ0 304 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 MED4Q9NPJ6 270 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 FKBP14Q9NWM8 211 aa4.29□□□□□ -1.72
UBR3-210ENST00000484596 PUS1Q9Y606 427 aaKnown RBP eCLIP4.29□□□□□ -1.72
UBR3-210ENST00000484596 RALGAPA2Q2PPJ7 1873 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 ASTN1O14525 1302 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 TRBV6-6A0A0A6YYG2 114 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 RAB19A4D1S5 217 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 RFXANKO14593 260 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 ITGB1BP1O14713 200 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 ZNF189O75820 626 aaPredicted RBP4.28□□□□□ -1.72
UBR3-210ENST00000484596 PLEKHA8P1O95397 391 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 SLC25A27O95847 323 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 HLA-DPB1P04440 258 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 CD37P11049 281 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 PSMC3P17980 439 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 KCNJ3P48549 501 aa4.28□□□□□ -1.72
UBR3-210ENST00000484596 CSNK1A1P48729 337 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms