RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 USE1Q9NZ43 259 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ZNRD1Q9P1U0 126 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF319Q9P2F9 582 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 GNG8Q9UK08 70 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 OR52A1Q9UKL2 312 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 SNX5Q9Y5X3 404 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 KMT2CQ8NEZ4 4911 aaKnown RBP5.8□□□□□ -1.48
COL17A1-205ENST00000480127 NOTCH3Q9UM47 2321 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 MEX3AA1L020 520 aaKnown RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 SNTNA6NMZ2 147 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 PRKYO43930 277 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 APOL3O95236 402 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 ALDOBP05062 364 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 POU3F4P49335 361 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 CEBPDP49716 269 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 CDC42P60953 191 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 CDK5Q00535 292 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 SLC34A1Q06495 639 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 MFGE8Q08431 387 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 PTGES3Q15185 160 aaKnown RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 CNN3Q15417 329 aaKnown RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 NSUN5P1Q3KNT7 163 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 KHDC1LQ5JSQ8 128 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 C11orf88Q6PI97 169 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 METAP1DQ6UB28 335 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 ACP7Q6ZNF0 438 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 C1orf122Q6ZSJ8 110 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 PRSS45Q7RTY3 260 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 MKXQ8IYA7 352 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 LY6G5BQ8NDX9 201 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 PPP1R35Q8TAP8 253 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 TMEM163Q8TC26 289 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 RPS4Y2Q8TD47 263 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 HPSE2Q8WWQ2 592 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 RORBQ92753 470 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 EMG1Q92979 244 aaKnown RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 ITFG2Q969R8 447 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 FOXRED1Q96CU9 486 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 NRBF2Q96F24 287 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 BORCS8Q96FH0 119 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 OR8B4Q96RC9 309 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 MYCBPQ99417 103 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 C19orf12Q9NSK7 152 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 NUFIP1Q9UHK0 495 aaKnown RBP5.79□□□□□ -1.48
COL17A1-205ENST00000480127 PITPNC1Q9UKF7 332 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 SLC22A13Q9Y226 551 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 POMPQ9Y244 141 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 R4GMQ9 66 aa5.79□□□□□ -1.48
COL17A1-205ENST00000480127 IGKV1D-17A0A075B6S4 117 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 hADV38S2A0JD32 116 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 METTL15A6NJ78 407 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 DLGAP1O14490 977 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 DYNC1I1O14576 645 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 SYNGR1O43759 233 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 TSPAN9O75954 239 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 OPN1MWP04001 364 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 CHRM2P08172 466 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 OPN1MW2P0DN77 364 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 OPN1MW3P0DN78 364 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 DCTDP32321 178 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 BMXP51813 675 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 ROM1Q03395 351 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 SCN1BQ07699 218 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 BNIP1Q12981 228 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 HERPUD1Q15011 391 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 GRK1Q15835 563 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 SSX2Q16385 188 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 NXNL2Q5VZ03 156 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 SLC35E4Q6ICL7 350 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 REC114Q7Z4M0 266 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 BCDIN3DQ7Z5W3 292 aaKnown RBP5.78□□□□□ -1.48
COL17A1-205ENST00000480127 ANGPTL5Q86XS5 388 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 EGFL6Q8IUX8 553 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 KLHDC1Q8N7A1 406 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 Q8N7P7 452 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF676Q8N7Q3 588 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 POC1AQ8NBT0 407 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 BEND2Q8NDZ0 799 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 OR4S1Q8NGB4 309 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 C8orf46Q8TAG6 207 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 SGCDQ92629 289 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 STMN2Q93045 179 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 SLAMF9Q96A28 289 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 AKR1E2Q96JD6 320 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 CEP19Q96LK0 163 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 OR5M11Q96RB7 305 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 ING3Q9NXR8 418 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 WARS2Q9UGM6 360 aaKnown RBP5.78□□□□□ -1.48
COL17A1-205ENST00000480127 COPS3Q9UNS2 423 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 AP4S1Q9Y587 144 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 RYR3Q15413 4870 aa5.78□□□□□ -1.48
COL17A1-205ENST00000480127 LOC107986453A0A1B0GWG9 222 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 TCRBV3S1A0A5B6 114 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 DAPL1A0PJW8 107 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 FUOMA2VDF0 154 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 CCDC182A6NF36 153 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 SAC3D1A6NKF1 404 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 MAGEB3O15480 346 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 MAGEB4O15481 346 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms