RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 SPINT3P49223 89 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 GNG2P59768 71 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 SPCS3P61009 180 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 SELENOTP62341 195 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 GLO1Q04760 184 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 LIPEQ05469 1076 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 OXA1LQ15070 435 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 NSDHLQ15738 373 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 KCTD21Q4G0X4 260 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 PTPN20Q4JDL3 420 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 C1orf100Q5SVJ3 147 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 CASC10Q5T4H9 136 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 HES5Q5TA89 166 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 TIGD3Q6B0B8 471 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 CLEC6AQ6EIG7 209 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 C3orf33Q6P1S2 294 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 SPESP1Q6UW49 350 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 TMEM205Q6UW68 189 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 PGAP1Q75T13 922 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 FAM122BQ7Z309 247 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 CRLF3Q8IUI8 442 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 ZFP62Q8NB50 900 aaPredicted RBP3.39□□□□□ -1.87
RFC4-212ENST00000479307 SPATA4Q8NEY3 305 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 OR4K14Q8NGD5 310 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 OR13C2Q8NGS9 318 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 MCOLN3Q8TDD5 553 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 CAPSLQ8WWF8 208 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 UFD1Q92890 307 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 TNFRSF14Q92956 283 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.39□□□□□ -1.87
RFC4-212ENST00000479307 CYYR1Q96J86 154 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 LYSMD1Q96S90 227 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 GON7Q9BXV9 100 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 ANGPTL4Q9BY76 406 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 HDHD2Q9H0R4 259 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 FN3KRPQ9HA64 309 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 C20orf96Q9NUD7 363 aaPredicted RBP3.39□□□□□ -1.87
RFC4-212ENST00000479307 GIN1Q9NXP7 522 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 ZNF282Q9UDV7 671 aaPredicted RBP3.39□□□□□ -1.87
RFC4-212ENST00000479307 CYB5R1Q9UHQ9 305 aa3.39□□□□□ -1.87
RFC4-212ENST00000479307 ROS1P08922 2347 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 IGKV1D-8A0A087WSZ0 117 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 FAM240BA0A1B0GVZ2 78 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 TCRBV9S1A1TA0A576 114 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 CCDC182A6NF36 153 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 OR6C70A6NIJ9 312 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 TIMM8AO60220 97 aaPredicted RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 SUPT7LO94864 414 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 RPP14O95059 124 aaKnown RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 SLC25A14O95258 325 aaPredicted RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 ATP6V1G2O95670 118 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 DHFRP00374 187 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 CSTAP01040 98 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 KRT16P08779 473 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 RALBP11234 206 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 GABRA1P14867 456 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 LOXP28300 417 aaPredicted RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 CASP1P29466 404 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 TAGLN2P37802 199 aaKnown RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 RFC3P40938 356 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 HLCSP50747 726 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 CAV2P51636 162 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 AP2S1P53680 142 aaPredicted RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 ATP1B3P54709 279 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 ATP6V0D1P61421 351 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 RPL23AP62750 156 aaKnown RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 LOXL1Q08397 574 aaPredicted RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 PSG7Q13046 419 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 DUSP7Q16829 419 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 YIF1BQ5BJH7 314 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 ARMC12Q5T9G4 340 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 OR2G6Q5TZ20 316 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 IL34Q6ZMJ4 242 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 TRAPPC5Q8IUR0 188 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 IFT20Q8IY31 132 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 LINC01555Q8NAE3 123 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 ZNF740Q8NDX6 193 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 OR4E2Q8NGC2 313 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 PYDC1Q8WXC3 89 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 TM4SF19Q96DZ7 209 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 TIMD4Q96H15 378 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 SLC22A4Q9H015 551 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 C20orf85Q9H1P6 137 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 BLZF1Q9H2G9 400 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 EML4Q9HC35 981 aaKnown RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 NT5MQ9NPB1 228 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 C19orf12Q9NSK7 152 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 EXD2Q9NVH0 621 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 PSMC3IPQ9P2W1 217 aaPredicted RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 PSMD13Q9UNM6 376 aa3.38□□□□□ -1.87
RFC4-212ENST00000479307 KLF13Q9Y2Y9 288 aaPredicted RBP3.38□□□□□ -1.87
RFC4-212ENST00000479307 HECTD4Q9Y4D8 3996 aa3.37□□□□□ -1.87
RFC4-212ENST00000479307 A0A0J9YY10 115 aa3.37□□□□□ -1.87
RFC4-212ENST00000479307 A6NIZ1 184 aa3.37□□□□□ -1.87
RFC4-212ENST00000479307 ZNF98A6NK75 572 aa3.37□□□□□ -1.87
RFC4-212ENST00000479307 A8MUA0 341 aa3.37□□□□□ -1.87
RFC4-212ENST00000479307 TRIM49D1C9J1S8 452 aa3.37□□□□□ -1.87
RFC4-212ENST00000479307 KLRC4-KLRK1H3BQV0 150 aa3.37□□□□□ -1.87
RFC4-212ENST00000479307 H7C0C1 242 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms