RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SLC25A33Q9BSK2 321 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 TSSK6Q9BXA6 273 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 HES4Q9HCC6 221 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 OR14J1Q9UGF5 321 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 PSMB11A5LHX3 300 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 J3QT63 122 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 ZNF737O75373 536 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 OR2F2O95006 317 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 NXPH2O95156 264 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 HTR1DP28221 377 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 MYCNOSP40205 109 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 HAAOP46952 286 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 EDDM3BP56851 147 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 PRR20EP86478 221 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 PRR20CP86479 221 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 PRR20DP86480 221 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 PRR20BP86481 221 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 PRR20AP86496 221 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 PLCXD3Q63HM9 321 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 HACD2Q6Y1H2 254 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 ZNF329Q86UD4 541 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 BATF2Q8N1L9 274 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 OR4P4Q8NGL7 312 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 ZNF714Q96N38 554 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 PRR25Q96S07 402 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 GORASP2Q9H8Y8 452 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 MED20Q9H944 212 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 BAIAP2Q9UQB8 552 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 SLC22A13Q9Y226 551 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 SESN1Q9Y6P5 492 aa9.01□□□□□ -0.97
BRCA1-213ENST00000476777 A0A0U1RQV5 110 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 FAM183AA6NL82 134 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 RIIAD1A6NNX1 92 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 HMGB1P1B2RPK0 211 aaPredicted RBP9□□□□□ -0.97
BRCA1-213ENST00000476777 DNAJC8O75937 253 aaPredicted RBP9□□□□□ -0.97
BRCA1-213ENST00000476777 GASTP01350 101 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 IFNGP01579 166 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 FABP3P05413 133 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 LYNP07948 512 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 SLC6A1P30531 599 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 LUMP51884 338 aaPredicted RBP9□□□□□ -0.97
BRCA1-213ENST00000476777 HMGA2P52926 109 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 MEF2CQ06413 473 aaPredicted RBP9□□□□□ -0.97
BRCA1-213ENST00000476777 RIPPLY1Q0D2K3 151 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 GDPD3Q7L5L3 318 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 TRPM8Q7Z2W7 1104 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 ZNF573Q86YE8 665 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 ZNF676Q8N7Q3 588 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 ASCC1Q8N9N2 400 aaKnown RBP9□□□□□ -0.97
BRCA1-213ENST00000476777 OR2T33Q8NG76 320 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 OTOSQ8NHW6 89 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 THEM6Q8WUY1 208 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 STMN2Q93045 179 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 ITFG2Q969R8 447 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 MCUR1Q96AQ8 359 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 CLEC7AQ9BXN2 247 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 KRTAP17-1Q9BYP8 105 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 TMEM133Q9H2Q1 129 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 NIPAL2Q9H841 368 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 EFCAB1Q9HAE3 211 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 IL1RAPQ9NPH3 570 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 CMC2Q9NRP2 79 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 FGFR1OP2Q9NVK5 253 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 POLDIP2Q9Y2S7 368 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 KLHDC2Q9Y2U9 406 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 LYVE1Q9Y5Y7 322 aa9□□□□□ -0.97
BRCA1-213ENST00000476777 SELENOFO60613 162 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 GMNNO75496 209 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 MMP23AO75900 390 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 KRT36O76013 467 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 NRASP01111 189 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 LYL1P12980 280 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 ATP6V1B1P15313 513 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 ZNF3P17036 446 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 MPZP25189 248 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 CHATP28329 748 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 BRS3P32247 399 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 PSME3P61289 254 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 ERVK11-1P61568 191 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 C9orf152Q5JTZ5 239 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 SAMD4BQ5PRF9 694 aaKnown RBP8.99□□□□□ -0.97
BRCA1-213ENST00000476777 LCE2AQ5TA79 106 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-213ENST00000476777 ZBTB49Q6ZSB9 765 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 RNF148Q8N7C7 305 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 KLHL30-AS1Q8NEE0 82 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 Q8NFD4 153 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 DUX3Q96PT4 197 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 ZFP57Q9NU63 452 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 ARMC1Q9NVT9 282 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 TAS2R1Q9NYW7 299 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 DPM3Q9P2X0 92 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 HHLA2Q9UM44 414 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 PIGLQ9Y2B2 252 aa8.99□□□□□ -0.97
BRCA1-213ENST00000476777 hADV38S2A0JD32 116 aa8.98□□□□□ -0.97
BRCA1-213ENST00000476777 PQLC2LA1A4F0 135 aa8.98□□□□□ -0.97
BRCA1-213ENST00000476777 NUDT19A8MXV4 375 aa8.98□□□□□ -0.97
BRCA1-213ENST00000476777 M0QZK8 103 aa8.98□□□□□ -0.97
BRCA1-213ENST00000476777 GSC2O15499 205 aa8.98□□□□□ -0.97
BRCA1-213ENST00000476777 SOX14O95416 240 aa8.98□□□□□ -0.97
BRCA1-213ENST00000476777 IGLV3-1P01715 115 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms