RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CCDC190Q86UF4 302 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 SAMD12Q8N8I0 201 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 DNAAF1Q8NEP3 725 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 OR51A2Q8NGJ7 313 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 CLDND2Q8NHS1 167 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 BORCS5Q969J3 196 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 LIN7BQ9HAP6 207 aa13.2□□□□□ -0.3
CPSF3-203ENST00000475482 CGGBP1Q9UFW8 167 aaPredicted RBP13.2□□□□□ -0.3
CPSF3-203ENST00000475482 A6NIN4 97 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 ANKRD30BLA7E2S9 258 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 HPGDSO60760 199 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 IGHV1-46P01743 117 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 APOA1P02647 267 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 RAC2P15153 192 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 ANOS1P23352 680 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 ACKR3P25106 362 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 ZNF81P51508 661 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 DVL1P1P54792 670 aaPredicted RBP13.19□□□□□ -0.3
CPSF3-203ENST00000475482 LMO4P61968 165 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 FAM189A2Q15884 450 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 UBE2NLQ5JXB2 153 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 TMEM42Q69YG0 159 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 BAIAP2L2Q6UXY1 529 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 KRT74Q7RTS7 529 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 LAX1Q8IWV1 398 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 SPATA3Q8NHX4 192 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 RAB40AQ8WXH6 277 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 HIST1H2AAQ96QV6 131 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 GPER1Q99527 375 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 CYSLTR2Q9NS75 346 aa13.19□□□□□ -0.3
CPSF3-203ENST00000475482 DYSFO75923 2080 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 IGHV1-69-2A0A0G2JMI3 117 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 FABP12A6NFH5 140 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 ZSCAN5BA6NJL1 495 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 CD300LBA8K4G0 201 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 B4DSR2 109 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 GMDSO60547 372 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 CDC14BO60729 498 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 CST4P01036 141 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 CD55P08174 381 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 UBBP0CG47 229 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 SNRPBP14678 240 aaKnown RBP13.18□□□□□ -0.3
CPSF3-203ENST00000475482 AZGP1P25311 298 aaKnown RBP13.18□□□□□ -0.3
CPSF3-203ENST00000475482 PSG7Q13046 419 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 DCTN2Q13561 401 aaKnown RBP13.18□□□□□ -0.3
CPSF3-203ENST00000475482 CR1LQ2VPA4 569 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 LHFPL2Q6ZUX7 228 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 OR5AS1Q8N127 324 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 OR56B2PQ8NGI1 322 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 OR52N4Q8NGI2 321 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 LGALS14Q8TCE9 139 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 S100A13Q99584 98 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 PAPOLGQ9BWT3 736 aaKnown RBP13.18□□□□□ -0.3
CPSF3-203ENST00000475482 PALMDQ9NP74 551 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 GHRLQ9UBU3 117 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 NOP16Q9Y3C1 178 aaKnown RBP13.18□□□□□ -0.3
CPSF3-203ENST00000475482 MPC1Q9Y5U8 109 aa13.18□□□□□ -0.3
CPSF3-203ENST00000475482 FAM157AC9JC47 383 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 PPIHO43447 177 aaKnown RBP13.17□□□□□ -0.3
CPSF3-203ENST00000475482 BPNT1O95861 308 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 ARSBP15848 533 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 SRD5A1P18405 259 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 KITLGP21583 273 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 FUT6P51993 359 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 PPP5CP53041 499 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 ATP1B3P54709 279 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 UBE2V2Q15819 145 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 PLCXD3Q63HM9 321 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 FAM131AQ6UXB0 335 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 MFSD4AQ8N468 514 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 C15orf40Q8WUR7 153 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 PIGCQ92535 297 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 PTX4Q96A99 478 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 PHF21AQ96BD5 680 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 FAM3DQ96BQ1 224 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 BORCS8Q96FH0 119 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 S100A16Q96FQ6 103 aaKnown RBP13.17□□□□□ -0.3
CPSF3-203ENST00000475482 DIRC2Q96SL1 478 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 MIXL1Q9H2W2 232 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 POFUT1Q9H488 388 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 SAP30LQ9HAJ7 183 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 GPR173Q9NS66 373 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 DECR2Q9NUI1 292 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 MRPL15Q9P015 296 aaKnown RBP13.17□□□□□ -0.3
CPSF3-203ENST00000475482 ZDHHC8Q9ULC8 765 aa13.17□□□□□ -0.3
CPSF3-203ENST00000475482 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 PLSCR5A0PG75 271 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 SPRY3O43610 288 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 PAHP00439 452 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 RBP2P50120 134 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 PITPNAQ00169 270 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 HLXQ14774 488 aaPredicted RBP13.16□□□□□ -0.3
CPSF3-203ENST00000475482 KISS1Q15726 138 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 C16orf87Q6PH81 154 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 CNIH2Q6PI25 160 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 IL17RELQ6ZVW7 336 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 MOB3CQ70IA8 216 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 ZDHHC23Q8IYP9 409 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 HAVCR1Q96D42 359 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 ELMOD3Q96FG2 381 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms