RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 HES4Q9HCC6 221 aa16.62■□□□□ 0.25
PDLIM4-206ENST00000474421 TCF7L1Q9HCS4 588 aa16.62■□□□□ 0.25
PDLIM4-206ENST00000474421 USE1Q9NZ43 259 aa16.62■□□□□ 0.25
PDLIM4-206ENST00000474421 SLC22A13Q9Y226 551 aa16.62■□□□□ 0.25
PDLIM4-206ENST00000474421 METTL15A6NJ78 407 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 KCNAB3O43448 404 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 SYT7O43581 403 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 ATP6V1E1P36543 226 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 IL24Q13007 206 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 AANATQ16613 207 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 HCP5Q6MZN7 132 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 CATSPERDQ86XM0 798 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 CALHM1Q8IU99 346 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 OR8J1Q8NGP2 316 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 RFKQ969G6 155 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 CENPNQ96H22 339 aaPredicted RBP16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 TBX5Q99593 518 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 GABARAPL3Q9BY60 117 aa16.61■□□□□ 0.25
PDLIM4-206ENST00000474421 A0A1W2PQL4 384 aaPredicted RBP16.6■□□□□ 0.25
PDLIM4-206ENST00000474421 GATBO75879 557 aaKnown RBP16.6■□□□□ 0.25
PDLIM4-206ENST00000474421 TMEM200BQ69YZ2 307 aa16.6■□□□□ 0.25
PDLIM4-206ENST00000474421 SSX6Q7RTT6 188 aa16.6■□□□□ 0.25
PDLIM4-206ENST00000474421 MKXQ8IYA7 352 aa16.6■□□□□ 0.25
PDLIM4-206ENST00000474421 OR10H4Q8NGA5 316 aa16.6■□□□□ 0.25
PDLIM4-206ENST00000474421 SSX3Q99909 188 aa16.6■□□□□ 0.25
PDLIM4-206ENST00000474421 MEGF9Q9H1U4 602 aa16.6■□□□□ 0.25
PDLIM4-206ENST00000474421 RAB18Q9NP72 206 aa16.6■□□□□ 0.25
PDLIM4-206ENST00000474421 OR14J1Q9UGF5 321 aa16.6■□□□□ 0.25
PDLIM4-206ENST00000474421 A6NIN4 97 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 H3BUX3 64 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 CIB2O75838 187 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 SERPINA3P01011 423 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 TK1P04183 234 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 LGALS4P56470 323 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 KRTAP10-3P60369 221 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 ERVFRD-1P60508 538 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 CDC42P60953 191 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 ERVK11-1P61568 191 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 DEFA6Q01524 100 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 LRRC75BQ2VPJ9 315 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 ASPHD2Q6ICH7 369 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 RORBQ92753 470 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 UBE2FQ969M7 185 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 C10orf35Q96D05 121 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 RBM4BQ9BQ04 359 aaKnown RBP16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 PPA2Q9H2U2 334 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 RIBC2Q9H4K1 309 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 OAZ3Q9UMX2 235 aa16.59■□□□□ 0.25
PDLIM4-206ENST00000474421 VWFP04275 2813 aa16.58■□□□□ 0.25
PDLIM4-206ENST00000474421 FAM230AA0A1W2PPH8 454 aa16.58■□□□□ 0.24
PDLIM4-206ENST00000474421 CEBPDP49716 269 aaPredicted RBP16.58■□□□□ 0.24
PDLIM4-206ENST00000474421 FUT6P51993 359 aa16.58■□□□□ 0.24
PDLIM4-206ENST00000474421 ODF4Q2M2E3 257 aa16.58■□□□□ 0.24
PDLIM4-206ENST00000474421 FAM220AQ7Z4H9 259 aa16.58■□□□□ 0.24
PDLIM4-206ENST00000474421 ANGPTL5Q86XS5 388 aa16.58■□□□□ 0.24
PDLIM4-206ENST00000474421 DTX3Q8N9I9 347 aa16.58■□□□□ 0.24
PDLIM4-206ENST00000474421 OR4M1Q8NGD0 313 aa16.58■□□□□ 0.24
PDLIM4-206ENST00000474421 TRMT10AQ8TBZ6 339 aaKnown RBP16.58■□□□□ 0.24
PDLIM4-206ENST00000474421 FBLN5Q9UBX5 448 aa16.58■□□□□ 0.24
PDLIM4-206ENST00000474421 K7N7A8 449 aa16.57■□□□□ 0.24
PDLIM4-206ENST00000474421 CHRM2P08172 466 aa16.57■□□□□ 0.24
PDLIM4-206ENST00000474421 UBCP0CG48 685 aaKnown RBP16.57■□□□□ 0.24
PDLIM4-206ENST00000474421 GABRA5P31644 462 aa16.57■□□□□ 0.24
PDLIM4-206ENST00000474421 POLR2IP36954 125 aaKnown RBP16.57■□□□□ 0.24
PDLIM4-206ENST00000474421 C11orf88Q6PI97 169 aa16.57■□□□□ 0.24
PDLIM4-206ENST00000474421 C17orf50Q8WW18 174 aa16.57■□□□□ 0.24
PDLIM4-206ENST00000474421 TRUB1Q8WWH5 349 aaKnown RBP16.57■□□□□ 0.24
PDLIM4-206ENST00000474421 CEP19Q96LK0 163 aa16.57■□□□□ 0.24
PDLIM4-206ENST00000474421 CHST5Q9GZS9 411 aa16.57■□□□□ 0.24
PDLIM4-206ENST00000474421 APOL3O95236 402 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 CNN3Q15417 329 aaKnown RBP16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 UBE2V2Q15819 145 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 SLC35E4Q6ICL7 350 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 LIAT1Q6ZQX7 453 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 Q8IYB0 196 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 BATF2Q8N1L9 274 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 C11orf42Q8N5U0 333 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 ASCC1Q8N9N2 400 aaKnown RBP16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 OR4C13Q8NGP0 309 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 PP6455Q8WZ26 134 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 EME1Q96AY2 570 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 AJUBAQ96IF1 538 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 IMPAD1Q9NX62 359 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 GNG8Q9UK08 70 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 ORC6Q9Y5N6 252 aa16.56■□□□□ 0.24
PDLIM4-206ENST00000474421 DSCAML1Q8TD84 2053 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 RBP4P02753 201 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 CCL3L1P16619 93 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 COX7A1P24310 79 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 COL10A1Q03692 680 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 ZNF273Q14593 569 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 C2orf68Q2NKX9 166 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 PDLIM3Q53GG5 364 aaPredicted RBP16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 GDPD3Q7L5L3 318 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 KCTD20Q7Z5Y7 419 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 BORCS8Q96FH0 119 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 RANBP3Q9H6Z4 567 aaPredicted RBP16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 MTCH1Q9NZJ7 389 aa16.55■□□□□ 0.24
PDLIM4-206ENST00000474421 LOC107986453A0A1B0GWG9 222 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 SAC3D1A6NKF1 404 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms