RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 MADCAM1Q13477 382 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 PRAMEF6Q5VXH4 476 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 OR10K2Q6IF99 312 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 Q6ZR03 302 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 LINC00596Q86U02 117 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 CCDC190Q86UF4 302 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 CALHM1Q8IU99 346 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 SNX29P2Q8IUI4 249 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 FAM58AQ8N1B3 248 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 BOLLQ8N9W6 283 aaKnown RBP8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 C19orf18Q8NEA5 215 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 OR4M1Q8NGD0 313 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 NEK7Q8TDX7 302 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 AQP3Q92482 292 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 MIXL1Q9H2W2 232 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 SPACA1Q9HBV2 294 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 AKIP1Q9NQ31 210 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 PPP1R3CQ9UQK1 317 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 ST3GAL6Q9Y274 331 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 PRR14LQ5THK1 2151 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 KALRNO60229 2985 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 ANKHD1Q8IWZ3 2542 aaKnown RBP8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 TRAV18A0A075B6X5 111 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 SIAH2O43255 324 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 XRCC3O43542 346 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 SYNGR1O43759 233 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 OR7C1O76099 320 aaPredicted RBP8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 CD37P11049 281 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 MPZP25189 248 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 BLVRBP30043 206 aaPredicted RBP8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 ETV6P41212 452 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 PPP5CP53041 499 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 RBM11P57052 281 aaKnown RBP8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 TAS2R20P59543 309 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 DEFA1P59665 94 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 DEFA3P59666 94 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 GNG2P59768 71 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 FGF12P61328 243 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 CCL8P80075 99 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 IKZF1Q13422 519 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 DCTN2Q13561 401 aaKnown RBP8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 ARFRP1Q13795 201 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 MSMPQ1L6U9 139 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 MPV17LQ2QL34 196 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 NKAPLQ5M9Q1 402 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 ATAD3CQ5T2N8 411 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 PEG10Q86TG7 708 aaKnown RBP8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 MOGAT3Q86VF5 341 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 IZUMO1Q8IYV9 350 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 BATF2Q8N1L9 274 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 GDPD1Q8N9F7 314 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 POC1AQ8NBT0 407 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 OR10R2Q8NGX6 335 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 OR10Z1Q8NGY1 313 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 LRRC29Q8WV35 223 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 GTF3AQ92664 365 aaKnown RBP8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 SLC25A38Q96DW6 304 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 RAB3CQ96E17 227 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 POM121Q96HA1 1249 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 CCDC32Q9BV29 185 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 CLEC4MQ9H2X3 399 aaPredicted RBP8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 PLEKHJ1Q9NW61 149 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 NPTNQ9Y639 398 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 ZFYVE26Q68DK2 2539 aa8.72□□□□□ -1.01
PRPF38A-202ENST00000474048 FAM90A10PA6NDY2 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A18PA6NE21 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A16PA6NEW6 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A20PA6NIJ5 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A8PA6NJQ4 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A7PA6NKC0 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A22PA8MWA6 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A12PA8MX19 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A5PA8MXJ8 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A23PA8MXZ1 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 SH2D1BO14796 132 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 AKR7A2O43488 359 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 TPPPO94811 219 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 CD55P08174 381 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 ADH4P08319 380 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A15PP0C7V4 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A13PP0C7W8 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A14PP0C7W9 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A24PP0C7X0 464 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 PGA5P0DJD9 388 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 ZNF44P15621 663 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 PRSS3P35030 304 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 EFNB2P52799 333 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 AP3S2P59780 193 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 TLE4Q04727 773 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 SCN1BQ07699 218 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 MAB21L1Q13394 359 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 UNC119Q13432 240 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 RBM39Q14498 530 aaKnown RBP8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 IL13RA2Q14627 380 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 HFEQ30201 348 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 RNASE12Q5GAN4 147 aaKnown RBP8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM76BQ5HYJ3 339 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 SPIN3Q5JUX0 258 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 ASCL4Q6XD76 172 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 C20orf204Q6ZNR8 217 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms