RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 OR14J1Q9UGF5 321 aa18.37■□□□□ 0.53
C9orf3-213ENST00000471978 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.37■□□□□ 0.53
C9orf3-213ENST00000471978 MPZP25189 248 aa18.36■□□□□ 0.53
C9orf3-213ENST00000471978 ODF4Q2M2E3 257 aa18.36■□□□□ 0.53
C9orf3-213ENST00000471978 SLC35E4Q6ICL7 350 aa18.36■□□□□ 0.53
C9orf3-213ENST00000471978 ANGPTL5Q86XS5 388 aa18.36■□□□□ 0.53
C9orf3-213ENST00000471978 OR2T27Q8NH04 317 aa18.36■□□□□ 0.53
C9orf3-213ENST00000471978 RORBQ92753 470 aa18.36■□□□□ 0.53
C9orf3-213ENST00000471978 AJUBAQ96IF1 538 aa18.36■□□□□ 0.53
C9orf3-213ENST00000471978 CIB1Q99828 191 aa18.36■□□□□ 0.53
C9orf3-213ENST00000471978 HEXA-AS1Q9H8Q6 139 aa18.36■□□□□ 0.53
C9orf3-213ENST00000471978 HES4Q9HCC6 221 aa18.36■□□□□ 0.53
C9orf3-213ENST00000471978 WARS2Q9UGM6 360 aaKnown RBP18.36■□□□□ 0.53
C9orf3-213ENST00000471978 CCL1P22362 96 aa18.35■□□□□ 0.53
C9orf3-213ENST00000471978 RASSF2P50749 326 aa18.35■□□□□ 0.53
C9orf3-213ENST00000471978 C1orf146Q5VVC0 180 aa18.35■□□□□ 0.53
C9orf3-213ENST00000471978 CALHM1Q8IU99 346 aa18.35■□□□□ 0.53
C9orf3-213ENST00000471978 C11orf42Q8N5U0 333 aa18.35■□□□□ 0.53
C9orf3-213ENST00000471978 TRMT10AQ8TBZ6 339 aaKnown RBP18.35■□□□□ 0.53
C9orf3-213ENST00000471978 MEGF9Q9H1U4 602 aa18.35■□□□□ 0.53
C9orf3-213ENST00000471978 PLEKHA1Q9HB21 404 aa18.35■□□□□ 0.53
C9orf3-213ENST00000471978 USE1Q9NZ43 259 aa18.35■□□□□ 0.53
C9orf3-213ENST00000471978 SLC7A11Q9UPY5 501 aa18.35■□□□□ 0.53
C9orf3-213ENST00000471978 hCG_1809904A0A1W2PP81 198 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 A0A1W2PPE2 198 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 FAM230AA0A1W2PPH8 454 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 A0A1W2PQL4 384 aaPredicted RBP18.34■□□□□ 0.53
C9orf3-213ENST00000471978 A0A1W2PR64 198 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 A0A1W2PRV1 198 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 APOL3O95236 402 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 TK1P04183 234 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 FCGR1AP12314 374 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 CCL3L1P16619 93 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 HTR1FP30939 366 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 LY6EQ16553 131 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 LRRC75BQ2VPJ9 315 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 CATSPERDQ86XM0 798 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 PKIBQ9C010 78 aa18.34■□□□□ 0.53
C9orf3-213ENST00000471978 METTL15A6NJ78 407 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 H3BSH0 61 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 SYT7O43581 403 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 OR2T7P0C7T2 308 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 COX7A1P24310 79 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 PAX6P26367 422 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 GABRA5P31644 462 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 POLR2IP36954 125 aaKnown RBP18.33■□□□□ 0.52
C9orf3-213ENST00000471978 ERVFRD-1P60508 538 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 ERVK11-1P61568 191 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 IL24Q13007 206 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 OR10H4Q8NGA5 316 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 PPP1R35Q8TAP8 253 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 FBLN5Q9UBX5 448 aa18.33■□□□□ 0.52
C9orf3-213ENST00000471978 PIPP12273 146 aaPredicted RBP18.32■□□□□ 0.52
C9orf3-213ENST00000471978 ATP6V1E1P36543 226 aa18.32■□□□□ 0.52
C9orf3-213ENST00000471978 BMXP51813 675 aa18.32■□□□□ 0.52
C9orf3-213ENST00000471978 LGALS4P56470 323 aa18.32■□□□□ 0.52
C9orf3-213ENST00000471978 ZNF273Q14593 569 aa18.32■□□□□ 0.52
C9orf3-213ENST00000471978 AANATQ16613 207 aa18.32■□□□□ 0.52
C9orf3-213ENST00000471978 ADI1Q9BV57 179 aa18.32■□□□□ 0.52
C9orf3-213ENST00000471978 RIBC2Q9H4K1 309 aa18.32■□□□□ 0.52
C9orf3-213ENST00000471978 K7N7A8 449 aa18.31■□□□□ 0.52
C9orf3-213ENST00000471978 SULT1C4O75897 302 aa18.31■□□□□ 0.52
C9orf3-213ENST00000471978 TSPAN15O95858 294 aa18.31■□□□□ 0.52
C9orf3-213ENST00000471978 COL10A1Q03692 680 aa18.31■□□□□ 0.52
C9orf3-213ENST00000471978 UBE2V2Q15819 145 aa18.31■□□□□ 0.52
C9orf3-213ENST00000471978 ZNF782Q6ZMW2 699 aaPredicted RBP18.31■□□□□ 0.52
C9orf3-213ENST00000471978 ASCC1Q8N9N2 400 aaKnown RBP18.31■□□□□ 0.52
C9orf3-213ENST00000471978 GABARAPL3Q9BY60 117 aa18.31■□□□□ 0.52
C9orf3-213ENST00000471978 OAZ3Q9UMX2 235 aa18.31■□□□□ 0.52
C9orf3-213ENST00000471978 SIGLEC9Q9Y336 463 aa18.31■□□□□ 0.52
C9orf3-213ENST00000471978 GATBO75879 557 aaKnown RBP18.3■□□□□ 0.52
C9orf3-213ENST00000471978 ATP5HO75947 161 aa18.3■□□□□ 0.52
C9orf3-213ENST00000471978 C2orf68Q2NKX9 166 aa18.3■□□□□ 0.52
C9orf3-213ENST00000471978 OR4C13Q8NGP0 309 aa18.3■□□□□ 0.52
C9orf3-213ENST00000471978 OR8J1Q8NGP2 316 aa18.3■□□□□ 0.52
C9orf3-213ENST00000471978 SLAMF9Q96A28 289 aa18.3■□□□□ 0.52
C9orf3-213ENST00000471978 CENPNQ96H22 339 aaPredicted RBP18.3■□□□□ 0.52
C9orf3-213ENST00000471978 CEP19Q96LK0 163 aa18.3■□□□□ 0.52
C9orf3-213ENST00000471978 RAB18Q9NP72 206 aa18.3■□□□□ 0.52
C9orf3-213ENST00000471978 MTCH1Q9NZJ7 389 aa18.3■□□□□ 0.52
C9orf3-213ENST00000471978 IGKV1-27A0A075B6S5 117 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 F8VVB4 439 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 F8VWA3 439 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 INMTO95050 263 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 SERPINA3P01011 423 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 CHRM2P08172 466 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 FUT6P51993 359 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 TMED1Q13445 227 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 CRIP3Q6Q6R5 217 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 PRSS35Q8N3Z0 413 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 CCDC54Q8NEL0 328 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 FAM110DQ8TAY7 271 aaPredicted RBP18.29■□□□□ 0.52
C9orf3-213ENST00000471978 RFKQ969G6 155 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 EME1Q96AY2 570 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 CHST5Q9GZS9 411 aa18.29■□□□□ 0.52
C9orf3-213ENST00000471978 C17orf98A8MV24 154 aa18.28■□□□□ 0.52
C9orf3-213ENST00000471978 ZNF737O75373 536 aa18.28■□□□□ 0.52
C9orf3-213ENST00000471978 KIR2DS4P43632 304 aa18.28■□□□□ 0.52
C9orf3-213ENST00000471978 DLX6P56179 175 aa18.28■□□□□ 0.52
C9orf3-213ENST00000471978 EDDM3BP56851 147 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms