RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RAC3P60763 192 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 TMEM187Q14656 261 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 CNN3Q15417 329 aaKnown RBP11.87□□□□□ -0.51
BRCA1-209ENST00000470026 RSPO4Q2I0M5 234 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-209ENST00000470026 UBAC2Q8NBM4 344 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 DMBX1Q8NFW5 382 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 FAAP24Q9BTP7 215 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 ZFP57Q9NU63 452 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 NECAP2Q9NVZ3 263 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 IL36GQ9NZH8 169 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 DKKL1Q9UK85 242 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 FAM96BQ9Y3D0 163 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 VCANP13611 3396 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 GJE1A6NN92 205 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 TNFSF11O14788 317 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 GDF9O60383 454 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 MED6O75586 246 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 F12P00748 615 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-209ENST00000470026 TMEM33P57088 247 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 ZNF528Q3MIS6 628 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 LHFPL2Q6ZUX7 228 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 OR1F12Q8NHA8 337 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 REEP6Q96HR9 211 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 NAA60Q9H7X0 242 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 TMEM38BQ9NVV0 291 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 ZNF391Q9UJN7 358 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 ANGPTL7O43827 346 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 NME2P22392 152 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 NTF4P34130 210 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 PI4KAP42356 2102 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 HOXA1P49639 335 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-209ENST00000470026 F2RL1P55085 397 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 PIGPP57054 158 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 SMCO1Q147U7 214 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 TAF9Q16594 264 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 AGBL5Q8NDL9 886 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 OR2AE1Q8NHA4 323 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 CMSS1Q9BQ75 279 aaKnown RBP11.86□□□□□ -0.51
BRCA1-209ENST00000470026 SULT4A1Q9BR01 284 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 ZNF581Q9P0T4 197 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 PTRH2Q9Y3E5 179 aaKnown RBP11.86□□□□□ -0.51
BRCA1-209ENST00000470026 H7C1Q1 480 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 PAX6P26367 422 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 UCP2P55851 309 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 UCP3P55916 312 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 RSU1Q15404 277 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 HLA-BQ31612 363 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 RPS19BP1Q86WX3 136 aaKnown RBP11.86□□□□□ -0.51
BRCA1-209ENST00000470026 CPT1CQ8TCG5 803 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 C18orf12Q96KH6 178 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 SUCNR1Q9BXA5 334 aa11.86□□□□□ -0.51
BRCA1-209ENST00000470026 RTTNQ86VV8 2226 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 SPEGQ15772 3267 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 IGKV1-12A0A0C4DH73 117 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 ZNF716A6NP11 495 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 E5RGE8 158 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 SPRY1O43609 319 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-209ENST00000470026 IGKV1D-12P01611 117 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 MBPP02686 304 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-209ENST00000470026 KLK3P07288 261 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-209ENST00000470026 SFTA3P0C7M3 94 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 SRD5A2P31213 254 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 RBP2P50120 134 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 DVL1P1P54792 670 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-209ENST00000470026 RRADP55042 308 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 ZNF774Q6NX45 483 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 SKA3Q8IX90 412 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 OR2Y1Q8NGV0 311 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 IFI44Q8TCB0 444 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 MARS2Q96GW9 593 aaKnown RBP11.85□□□□□ -0.51
BRCA1-209ENST00000470026 POM121Q96HA1 1249 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 SAV1Q9H4B6 383 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-209ENST00000470026 RGCCQ9H4X1 137 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 MLXQ9UH92 298 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 PILRBQ9UKJ0 227 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 KCNIP3Q9Y2W7 256 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 NSG2Q9Y328 171 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 STARD10Q9Y365 291 aa11.85□□□□□ -0.51
BRCA1-209ENST00000470026 CCDC187A0A096LP49 1063 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 hCG_38984A0A1B0GV85 526 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 MEX3AA1L020 520 aaKnown RBP11.84□□□□□ -0.51
BRCA1-209ENST00000470026 C9JQL5 133 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 NTN3O00634 580 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-209ENST00000470026 ZNF728P0DKX0 622 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 PMELP40967 661 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 RAB13P51153 203 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 TRA2AQ13595 282 aaKnown RBP eCLIP11.84□□□□□ -0.51
BRCA1-209ENST00000470026 GGNQ86UU5 652 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 FOXRED2Q8IWF2 684 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 OR10AD1Q8NGE0 317 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 KCNE4Q8WWG9 221 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 RTN4IP1Q8WWV3 396 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-209ENST00000470026 ERGIC1Q969X5 290 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 SCRT1Q9BWW7 348 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 BCO1Q9HAY6 547 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 FAM230AA0A1W2PPH8 454 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 G3V3Y1 287 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 OR5AC1P0C628 307 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 SEC11BP0C7V7 166 aa11.84□□□□□ -0.51
BRCA1-209ENST00000470026 LMO1P25800 156 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms