RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 DMXL1Q9Y485 3027 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 EFSO43281 561 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST1H2BKO60814 126 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST1H2BJP06899 126 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST1H2BOP23527 126 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST1H2BBP33778 126 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 FOLR3P41439 243 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 ATP1B3P54709 279 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST1H2BDP58876 126 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST1H2BCP62807 126 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 SHBQ15464 509 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 KCNMB1Q16558 191 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST2H2BEQ16778 126 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.89□□□□□ -0.67
USP11-206ENST00000469080 RIPPLY2Q5TAB7 128 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 ZNF468Q5VIY5 522 aaPredicted RBP10.89□□□□□ -0.67
USP11-206ENST00000469080 RTL6Q6ICC9 239 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 OGFOD3Q6PK18 319 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 BTNL3Q6UXE8 466 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 TMEM108Q6UXF1 575 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 KCTD9Q7L273 389 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 C1orf210Q8IVY1 113 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HPSE2Q8WWQ2 592 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST1H2BHQ93079 126 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST1H2BNQ99877 126 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HIST1H2BMQ99879 126 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 TMEM14AQ9Y6G1 99 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 LOC102724200A0A096LPH7 203 aaPredicted RBP10.89□□□□□ -0.67
USP11-206ENST00000469080 LOC107986453A0A1B0GWG9 222 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 C20orf202A1L168 122 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 M0QZK8 103 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 FGF16O43320 207 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 CD79AP11912 226 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 PGAM2P15259 253 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 GDF1P27539 372 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 HERPUD1Q15011 391 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 LINC01590Q5TEZ4 76 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 OVCH1Q7RTY7 1134 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 FAM185AQ8N0U4 392 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 TMEM105Q8N8V8 129 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 OR5R1Q8NH85 324 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 PPP1R1CQ8WVI7 109 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 NAT6Q93015 286 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 ZNF649Q9BS31 505 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 FOXJ2Q9P0K8 574 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 GSKIPQ9P0R6 139 aa10.89□□□□□ -0.67
USP11-206ENST00000469080 ZNF318Q5VUA4 2279 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 EEF1E1-BLOC1S5C9J1V9 151 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 TMEM238C9JI98 176 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 CLPSP04118 112 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 SELEP16581 610 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 PI3P19957 117 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 CDKN1BP46527 198 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 DCAF7P61962 342 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 WIPI1Q5MNZ9 446 aaPredicted RBP10.88□□□□□ -0.67
USP11-206ENST00000469080 SPINK14Q6IE38 97 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 ADPRHL1Q8NDY3 354 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 OR5AP2Q8NGF4 316 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 SAP25Q8TEE9 199 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 C11orf40Q8WZ69 217 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 PIGTQ969N2 578 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 PGAM5Q96HS1 289 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 GUCD1Q96NT3 240 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 GPR173Q9NS66 373 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 OR5V1Q9UGF6 321 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 A0A1B0GV50 99 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 RNF222A6NCQ9 220 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 MFNGO00587 321 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 TSPAN2O60636 221 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 TRGC2P03986 189 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 PLGLB1Q02325 96 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 RHEBQ15382 184 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 UBE2V2Q15819 145 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 RAB11BQ15907 218 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 BRICD5Q6PL45 260 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 BHLHE23Q8NDY6 225 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 MIB2Q96AX9 1013 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 PADI1Q9ULC6 663 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 ATMQ13315 3056 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 CCDC187A0A096LP49 1063 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 A0A096LPE4 126 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 A0A1W2PPZ6 126 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 PLPP3O14495 311 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 STK17BO94768 372 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 P04436 131 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 AMY2AP04746 511 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 ASAH2BP0C7U1 165 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 ALOX5APP20292 161 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 SLC25A30Q5SVS4 291 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 ATP1A1-AS1Q5TC04 95 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 AWAT2Q6E213 333 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 ZNF585AQ6P3V2 769 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 DNASE2BQ8WZ79 361 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 TXNIPQ9H3M7 391 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 TIMM10BQ9Y5J6 103 aa10.88□□□□□ -0.67
USP11-206ENST00000469080 ZNF727A8MUV8 499 aa10.87□□□□□ -0.67
USP11-206ENST00000469080 UMAD1C9J7I0 102 aa10.87□□□□□ -0.67
USP11-206ENST00000469080 SLC33A1O00400 549 aaPredicted RBP10.87□□□□□ -0.67
USP11-206ENST00000469080 ARPC3O15145 178 aa10.87□□□□□ -0.67
USP11-206ENST00000469080 CYB5BO43169 146 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms