RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 METTL15A6NJ78 407 aa17.78■□□□□ 0.44
TTC28-204ENST00000468807 H3BUX3 64 aa17.78■□□□□ 0.44
TTC28-204ENST00000468807 M0QZ24 198 aa17.78■□□□□ 0.44
TTC28-204ENST00000468807 SYT7O43581 403 aa17.78■□□□□ 0.44
TTC28-204ENST00000468807 CALHM1Q8IU99 346 aa17.78■□□□□ 0.44
TTC28-204ENST00000468807 C17orf50Q8WW18 174 aa17.78■□□□□ 0.44
TTC28-204ENST00000468807 DHRS7CA6NNS2 312 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 TIMM23O14925 209 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 NOS1APO75052 506 aaPredicted RBP17.77■□□□□ 0.44
TTC28-204ENST00000468807 INMTO95050 263 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 PIPP12273 146 aaPredicted RBP17.77■□□□□ 0.44
TTC28-204ENST00000468807 COX7A1P24310 79 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 TGFBR2P37173 567 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 PROK1P58294 105 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 TMEM200BQ69YZ2 307 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 HCP5Q6MZN7 132 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 CATSPERDQ86XM0 798 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 BEND2Q8NDZ0 799 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 CENPNQ96H22 339 aaPredicted RBP17.77■□□□□ 0.44
TTC28-204ENST00000468807 GABARAPL3Q9BY60 117 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 TCF7L1Q9HCS4 588 aa17.77■□□□□ 0.44
TTC28-204ENST00000468807 CLPXO76031 633 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 CCL3L1P16619 93 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 CCL1P22362 96 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 LY6EQ16553 131 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 MIDNQ504T8 468 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 FAM220AQ7Z4H9 259 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 ASCC1Q8N9N2 400 aaKnown RBP17.76■□□□□ 0.43
TTC28-204ENST00000468807 OR8J1Q8NGP2 316 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 RORBQ92753 470 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 RFKQ969G6 155 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 SSX3Q99909 188 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 USE1Q9NZ43 259 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 GNG8Q9UK08 70 aa17.76■□□□□ 0.43
TTC28-204ENST00000468807 hCG_1809904A0A1W2PP81 198 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 A0A1W2PPE2 198 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 A0A1W2PR64 198 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 A0A1W2PRV1 198 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 GATBO75879 557 aaKnown RBP17.75■□□□□ 0.43
TTC28-204ENST00000468807 SULT1C4O75897 302 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 TK1P04183 234 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 MPZP25189 248 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 PAX6P26367 422 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 ERVFRD-1P60508 538 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 CDC42P60953 191 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 DEFA6Q01524 100 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 IL24Q13007 206 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 TP53I3Q53FA7 332 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 UBE2FQ969M7 185 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 SLAMF9Q96A28 289 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 EME1Q96AY2 570 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 RBM4BQ9BQ04 359 aaKnown RBP17.75■□□□□ 0.43
TTC28-204ENST00000468807 PKIBQ9C010 78 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 FAM234AQ9H0X4 552 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 C16orf95Q9H693 158 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 HEXA-AS1Q9H8Q6 139 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 HES4Q9HCC6 221 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 IMPAD1Q9NX62 359 aa17.75■□□□□ 0.43
TTC28-204ENST00000468807 MEX3AA1L020 520 aaKnown RBP17.74■□□□□ 0.43
TTC28-204ENST00000468807 SERPINA3P01011 423 aa17.74■□□□□ 0.43
TTC28-204ENST00000468807 LGALS4P56470 323 aa17.74■□□□□ 0.43
TTC28-204ENST00000468807 COL10A1Q03692 680 aa17.74■□□□□ 0.43
TTC28-204ENST00000468807 ZNF273Q14593 569 aa17.74■□□□□ 0.43
TTC28-204ENST00000468807 UBE2V2Q15819 145 aa17.74■□□□□ 0.43
TTC28-204ENST00000468807 ZNF782Q6ZMW2 699 aaPredicted RBP17.74■□□□□ 0.43
TTC28-204ENST00000468807 Q6ZSR3 168 aa17.74■□□□□ 0.43
TTC28-204ENST00000468807 PYDC1Q8WXC3 89 aa17.74■□□□□ 0.43
TTC28-204ENST00000468807 CEP19Q96LK0 163 aa17.74■□□□□ 0.43
TTC28-204ENST00000468807 OSBPL10Q9BXB5 764 aa17.74■□□□□ 0.43
TTC28-204ENST00000468807 LOC107986453A0A1B0GWG9 222 aa17.73■□□□□ 0.43
TTC28-204ENST00000468807 BMXP51813 675 aa17.73■□□□□ 0.43
TTC28-204ENST00000468807 EDDM3BP56851 147 aa17.73■□□□□ 0.43
TTC28-204ENST00000468807 LRRC75BQ2VPJ9 315 aa17.73■□□□□ 0.43
TTC28-204ENST00000468807 ASPHD2Q6ICH7 369 aa17.73■□□□□ 0.43
TTC28-204ENST00000468807 SLC35E4Q6ICL7 350 aa17.73■□□□□ 0.43
TTC28-204ENST00000468807 RDH10Q8IZV5 341 aa17.73■□□□□ 0.43
TTC28-204ENST00000468807 PRSS35Q8N3Z0 413 aa17.73■□□□□ 0.43
TTC28-204ENST00000468807 BORCS8Q96FH0 119 aa17.73■□□□□ 0.43
TTC28-204ENST00000468807 ORC6Q9Y5N6 252 aa17.73■□□□□ 0.43
TTC28-204ENST00000468807 NOTCH1P46531 2555 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 TSPAN9O75954 239 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 UBCP0CG48 685 aaKnown RBP17.72■□□□□ 0.43
TTC28-204ENST00000468807 GABRA5P31644 462 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 FUT6P51993 359 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 ERVK11-1P61568 191 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 ZNF85Q03923 595 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 TMED1Q13445 227 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 SLC25A26Q70HW3 274 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 GDPD3Q7L5L3 318 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 CHST5Q9GZS9 411 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 MMP27Q9H306 513 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 MTCH1Q9NZJ7 389 aa17.72■□□□□ 0.43
TTC28-204ENST00000468807 IGKV1-27A0A075B6S5 117 aa17.71■□□□□ 0.43
TTC28-204ENST00000468807 F8VVB4 439 aa17.71■□□□□ 0.43
TTC28-204ENST00000468807 F8VWA3 439 aa17.71■□□□□ 0.43
TTC28-204ENST00000468807 K7N7A8 449 aa17.71■□□□□ 0.43
TTC28-204ENST00000468807 CHRM2P08172 466 aa17.71■□□□□ 0.43
TTC28-204ENST00000468807 CNN3Q15417 329 aaKnown RBP17.71■□□□□ 0.43
TTC28-204ENST00000468807 PLA1AQ53H76 456 aa17.71■□□□□ 0.43
TTC28-204ENST00000468807 EGFL6Q8IUX8 553 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms