RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 OR2AT4A6NND4 320 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 CD300LBA8K4G0 201 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 MCRIP1C9JLW8 97 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 F5H5P2 479 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 SMLR1H3BR10 107 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 PDCD6O75340 191 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 SLC22A5O76082 557 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 HTR3BO95264 441 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 IGKV1D-12P01611 117 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 HOXD4P09016 255 aaPredicted RBP6.56□□□□□ -1.36
COL6A3-208ENST00000468792 ACAA1P09110 424 aaPredicted RBP6.56□□□□□ -1.36
COL6A3-208ENST00000468792 CD79AP11912 226 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 PPP3CBP16298 524 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 ZNF14P17017 642 aaPredicted RBP6.56□□□□□ -1.36
COL6A3-208ENST00000468792 AMY2BP19961 511 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 FUT3P21217 361 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 NFYAP23511 347 aaPredicted RBP6.56□□□□□ -1.36
COL6A3-208ENST00000468792 CALCRP30988 508 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 OR3A3P47888 321 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 FOXG1P55316 489 aaPredicted RBP6.56□□□□□ -1.36
COL6A3-208ENST00000468792 SNU13P55769 128 aaKnown RBP6.56□□□□□ -1.36
COL6A3-208ENST00000468792 PER3P56645 1201 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 H2BFSP57053 126 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 TBC1D28Q2M2D7 210 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 MPV17LQ2QL34 196 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 DEFB109BQ30KR1 87 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 SCGB2B2Q4G0G5 96 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 OXLD1Q5BKU9 147 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 FAM76BQ5HYJ3 339 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 AADACL3Q5VUY0 350 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 PLCXD3Q63HM9 321 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 OR52W1Q6IF63 320 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 LIN54Q6MZP7 749 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 DHRS11Q6UWP2 260 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 UNQ6126/PRO20091Q6UXV3 157 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 MOB3CQ70IA8 216 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 ZNF573Q86YE8 665 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 MKXQ8IYA7 352 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 SLC30A7Q8NEW0 376 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 OR56B2PQ8NGI1 322 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 OR52B4Q8NGK2 314 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 OR5D18Q8NGL1 313 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 OR51F2Q8NH61 342 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 LILRB4Q8NHJ6 448 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 NPRL2Q8WTW4 380 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 PIGCQ92535 297 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 PHB2Q99623 299 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 PKIBQ9C010 78 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 IFT22Q9H7X7 185 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 SPACA1Q9HBV2 294 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 PRSS50Q9UI38 385 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 ANXA10Q9UJ72 324 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 STARD10Q9Y365 291 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 CSAG2Q9Y5P2 127 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 ARHGAP21Q5T5U3 1957 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 MUC6Q6W4X9 2439 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 ZFHX2Q9C0A1 2572 aaPredicted RBP6.56□□□□□ -1.36
COL6A3-208ENST00000468792 MBD3L4A6NDZ8 208 aaPredicted RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 MBD3L3A6NE82 208 aaPredicted RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 MBD3L5A6NJ08 208 aaPredicted RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 RFPL4AA6NLU0 287 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 ANKRD30BLA7E2S9 258 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 ZNF850A8MQ14 1090 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 RFPL4AL1F8VTS6 287 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 IFNA7P01567 189 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 IGKV3-15P01624 115 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 HLA-AP01891 365 aaKnown RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 PMP2P02689 132 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 SLC25A4P12235 298 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 RPA2P15927 270 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 CBR1P16152 277 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 SELEP16581 610 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 IGHV1-2P23083 117 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 CD34P28906 385 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 WNT5AP41221 380 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 KIR2DL2P43627 348 aaPredicted RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 RBM11P57052 281 aaKnown RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 FGF12P61328 243 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 SEC61A1P61619 476 aaKnown RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 GNG3P63215 75 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 IL13RA1P78552 427 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 CYCSP99999 105 aaKnown RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 IL24Q13007 206 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 PRDX4Q13162 271 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 SRSF6Q13247 344 aaKnown RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 IL13RA2Q14627 380 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 P2RY6Q15077 328 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 GABRA6Q16445 453 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 C3AR1Q16581 482 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 NKPD1Q17RQ9 610 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 C3orf36Q3SXR2 165 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 CHRFAM7AQ494W8 412 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 ACSF3Q4G176 576 aaPredicted RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 LY6G6FQ5SQ64 297 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 ZNF660Q6AZW8 331 aaPredicted RBP6.55□□□□□ -1.36
COL6A3-208ENST00000468792 TEX261Q6UWH6 196 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 MDP1Q86V88 176 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 ZNF611Q8N823 705 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 OR10AD1Q8NGE0 317 aa6.55□□□□□ -1.36
COL6A3-208ENST00000468792 OR10K1Q8NGX5 313 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms