RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 IQCF5A8MTL0 148 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 UPK1AO00322 258 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 CETN3O15182 167 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 IGKV1-39P01597 117 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 APOA1P02647 267 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 IGKV1D-39P04432 117 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 SNRPAP09012 282 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 ZNF14P17017 642 aaPredicted RBP2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 OR12D2P58182 307 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 ELF3P78545 371 aaPredicted RBP2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 XRCC4Q13426 336 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 C18orf21Q32NC0 220 aaPredicted RBP2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 SP6Q3SY56 376 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 FAM104BQ5XKR9 115 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 CASP12Q6UXS9 341 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 BBS7Q8IWZ6 715 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 OR51Q1Q8NH59 317 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 DOK4Q8TEW6 326 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 CACNG8Q8WXS5 425 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 SMIM8Q96KF7 97 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 ATP6V1G3Q96LB4 118 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 ZFP3Q96NJ6 502 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 SPACA5Q96QH8 159 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 VAT1Q99536 393 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 CIB1Q99828 191 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 ZNF649Q9BS31 505 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 MRPL20Q9BYC9 149 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 RAB1BQ9H0U4 201 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 SLC38A1Q9H2H9 487 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 CA10Q9NS85 328 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 STX18Q9P2W9 335 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 ANXA10Q9UJ72 324 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 ADGRL1O94910 1474 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 COL1A2P08123 1366 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 ANKRD12Q6UB98 2062 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 RAB19A4D1S5 217 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 K7EN84 100 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 K7ERQ8 282 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 MFNGO00587 321 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 IL5RAQ01344 420 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 LINC00303Q3SY05 128 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 ATP6AP1LQ52LC2 224 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 FAHD1Q6P587 224 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 SPINT4Q6UDR6 99 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 C16orf47Q6ZP98 133 aaPredicted RBP2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 RBM45Q8IUH3 476 aaKnown RBP2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 CD302Q8IX05 232 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 CYP4Z2PQ8N1L4 340 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 OR4K2Q8NGD2 314 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 COPS4Q9BT78 406 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 SPACA1Q9HBV2 294 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 PARP11Q9NR21 331 aa2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.39□□□□□ -2.03
CDC42BPA-211ENST00000466538 KIR2DS1A0A191URI9 304 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 GOLGA6L4A6NEF3 574 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 C16orf90A8MZG2 172 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 C9JQL5 133 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 CBR3O75828 277 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 SC5DO75845 299 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 CD8AP01732 235 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 CD28P10747 220 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 HLA-DMAP28067 261 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 LCN1P31025 176 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 NUDT2P50583 147 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 SLC18A1P54219 525 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 KRTAP10-8P60410 259 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 TNNC1P63316 161 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 ATP5G2Q06055 141 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 CLEC12AQ5QGZ9 265 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 KCTD16Q68DU8 428 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 ZFAND6Q6FIF0 208 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 UGT2A3Q6UWM9 527 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 FAM231DQ6ZW35 169 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 TRMT10CQ7L0Y3 403 aaKnown RBP2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 FAM57AQ8TBR7 257 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 YIPF6Q96EC8 236 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 LLPHQ9BRT6 129 aaKnown RBP2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 HINT2Q9BX68 163 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 MS4A8Q9BY19 250 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 LINC00574Q9H8X3 128 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 ABCB9Q9NP78 766 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 ACOT13Q9NPJ3 140 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 NLE1Q9NVX2 485 aaPredicted RBP2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 RBM22Q9NW64 420 aaKnown RBP eCLIP2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 RMND1Q9NWS8 449 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 RWDD2AQ9UIY3 292 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 C15orf41Q9Y2V0 281 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 TICRRQ7Z2Z1 1910 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 ELP1O95163 1332 aa2.38□□□□□ -2.03
CDC42BPA-211ENST00000466538 OR2AT4A6NND4 320 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 UPK2O00526 184 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 BRI3O95415 125 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 IGKV1D-16P01601 117 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 IGLV7-43P04211 117 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 CCL2P13500 99 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 TGM4P49221 684 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 RPL10AP62906 217 aaKnown RBP2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 CTAG1AP78358 180 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 MEF2CQ06413 473 aaPredicted RBP2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 PMVKQ15126 192 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms