RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TPRA1Q86W33 373 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 SAXO1Q8IYX7 474 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 MUC20Q8N307 709 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-209ENST00000465132 ZSCAN4Q8NAM6 433 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-209ENST00000465132 SCCPDHQ8NBX0 429 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 NPRL2Q8WTW4 380 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 UQCC2Q9BRT2 126 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 UFSP2Q9NUQ7 469 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 A0A1W2PPK0 400 aa14.65□□□□□ -0.06
CPSF4-209ENST00000465132 CDIPTO14735 213 aa14.65□□□□□ -0.06
CPSF4-209ENST00000465132 AIREO43918 545 aa14.65□□□□□ -0.06
CPSF4-209ENST00000465132 CDC14BO60729 498 aa14.65□□□□□ -0.06
CPSF4-209ENST00000465132 ZNF780AO75290 641 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-209ENST00000465132 MPZP25189 248 aa14.65□□□□□ -0.06
CPSF4-209ENST00000465132 GPR176Q14439 515 aa14.65□□□□□ -0.06
CPSF4-209ENST00000465132 PRAMEF6Q5VXH4 476 aa14.65□□□□□ -0.06
CPSF4-209ENST00000465132 HAGHLQ6PII5 290 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-209ENST00000465132 TMEM91Q6ZNR0 172 aa14.65□□□□□ -0.06
CPSF4-209ENST00000465132 SATL1Q86VE3 508 aa14.65□□□□□ -0.06
CPSF4-209ENST00000465132 AQP3Q92482 292 aa14.65□□□□□ -0.06
CPSF4-209ENST00000465132 METTL17Q9H7H0 456 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-209ENST00000465132 TXNL4BQ9NX01 149 aaKnown RBP14.65□□□□□ -0.06
CPSF4-209ENST00000465132 IGKV1-9A0A0C4DH69 117 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 LOC100506127A0A0U1RQW1 187 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 TRAPPC2LH3BP13 241 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 PPIHO43447 177 aaKnown RBP14.64□□□□□ -0.07
CPSF4-209ENST00000465132 NDUFA2O43678 99 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 MAS1P04201 325 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 TFAP2AP05549 437 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 GPR6P46095 362 aaPredicted RBP14.64□□□□□ -0.07
CPSF4-209ENST00000465132 ALDH3B2P48448 385 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 FAM90A1Q86YD7 464 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 JAGN1Q8N5M9 183 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 YIPF6Q96EC8 236 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 CHCHD6Q9BRQ6 235 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 GHRLQ9UBU3 117 aa14.64□□□□□ -0.07
CPSF4-209ENST00000465132 TRAV38-1A0A0B4J264 116 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 B4DSR2 109 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 TMEM178BH3BS89 294 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 NOS1APO75052 506 aaPredicted RBP14.63□□□□□ -0.07
CPSF4-209ENST00000465132 TMEM127O75204 238 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 UBBP0CG47 229 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 TMEM225BP0DP42 221 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 MUC1P15941 1255 aaPredicted RBP14.63□□□□□ -0.07
CPSF4-209ENST00000465132 GADD45AP24522 165 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 COL8A2P25067 703 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 MTNR1BP49286 362 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 PDZK1IP1Q13113 114 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 MPPED2Q15777 294 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 SMIM21Q3B7S5 101 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 C22orf42Q6IC83 251 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 WDR82Q6UXN9 313 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 CROCCP3Q8IVE0 287 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 LRRC29Q8WV35 223 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 RPL3LQ92901 407 aaKnown RBP14.63□□□□□ -0.07
CPSF4-209ENST00000465132 C12orf43Q96C57 262 aaKnown RBP14.63□□□□□ -0.07
CPSF4-209ENST00000465132 BCL7BQ9BQE9 202 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 DNAJB11Q9UBS4 358 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 GLS2Q9UI32 602 aa14.63□□□□□ -0.07
CPSF4-209ENST00000465132 TRAV8-7A0A075B6U6 113 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 PPIAL4EA0A075B759 164 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 PPIAL4DF5H284 164 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 H3BUI4 141 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 PIN1P1O15428 100 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 RP2O75695 350 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 PPIAL4FP0DN26 164 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 MDH2P40926 338 aaKnown RBP14.62□□□□□ -0.07
CPSF4-209ENST00000465132 POU3F4P49335 361 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 MICBQ29980 383 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 SLC25A26Q70HW3 274 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 WDR86Q86TI4 376 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 GLCCI1Q86VQ1 547 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 SPICQ8N5J4 248 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 POC1AQ8NBT0 407 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 PXT1Q8NFP0 134 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 OR52N4Q8NGI2 321 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 OR51F2Q8NH61 342 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 CLDND2Q8NHS1 167 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 ZNF420Q8TAQ5 688 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-209ENST00000465132 TMIGD2Q96BF3 282 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 CEP19Q96LK0 163 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 FUNDC2Q9BWH2 189 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 PPP1R3EQ9H7J1 279 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 METRNQ9UJH8 293 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 PPIAL4AQ9Y536 164 aa14.62□□□□□ -0.07
CPSF4-209ENST00000465132 IGHV3-64DA0A0J9YX35 117 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 SRRM5B3KS81 715 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 CSTBP04080 98 aaKnown RBP14.61□□□□□ -0.07
CPSF4-209ENST00000465132 RAB3BP20337 219 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 GLRA1P23415 457 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 PTGFRP43088 359 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 BTG1P62324 171 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 INSL4Q14641 139 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 RSU1Q15404 277 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 FAM189A2Q15884 450 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 ANKRD13BQ86YJ7 626 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.61□□□□□ -0.07
CPSF4-209ENST00000465132 OR51A2Q8NGJ7 313 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 OR6M1Q8NGM8 313 aa14.61□□□□□ -0.07
CPSF4-209ENST00000465132 TNFAIP8L1Q8WVP5 186 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms