RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SRRM5B3KS81 715 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 ZNF879B4DU55 563 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 J3QLI3 93 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 NDUFA2O43678 99 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 GPX5O75715 221 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 SC5DO75845 299 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 ATF1P18846 271 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 GATA3P23771 443 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 MAPK3P27361 379 aaPredicted RBP14.18□□□□□ -0.14
VPS52-215ENST00000464425 GABRA5P31644 462 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 SOX2P48431 317 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 FUT6P51993 359 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 CNN3Q15417 329 aaKnown RBP14.18□□□□□ -0.14
VPS52-215ENST00000464425 WDR25Q64LD2 544 aaPredicted RBP14.18□□□□□ -0.14
VPS52-215ENST00000464425 ZNF529Q6P280 563 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 DNAAF1Q8NEP3 725 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 OR13C5Q8NGS8 318 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 TRMT10AQ8TBZ6 339 aaKnown RBP14.18□□□□□ -0.14
VPS52-215ENST00000464425 NPRL2Q8WTW4 380 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 CCL13Q99616 98 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 TMED9Q9BVK6 235 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 NDUFB11Q9NX14 153 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 OPN4Q9UHM6 478 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 SLC7A11Q9UPY5 501 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 INSIG2Q9Y5U4 225 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 CUBNO60494 3623 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 FAM230AA0A1W2PPH8 454 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 PQLC2LA1A4F0 135 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 MAGEA13PA6NCF6 341 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 CCRL2O00421 344 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 TMPRSS2O15393 492 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 MUC1P15941 1255 aaPredicted RBP14.17□□□□□ -0.14
VPS52-215ENST00000464425 JUNBP17275 347 aaPredicted RBP14.17□□□□□ -0.14
VPS52-215ENST00000464425 PRKACBP22694 351 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 PSMB9P28065 219 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 HAAOP46952 286 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 SSX1Q16384 188 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 ACSM3Q53FZ2 586 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 ZNF671Q8TAW3 534 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 AQP3Q92482 292 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 PHYHIPQ92561 330 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 MUL1Q969V5 352 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 SPSB1Q96BD6 273 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 DERL3Q96Q80 235 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 OR14A2Q96R54 314 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 NEK6Q9HC98 313 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 SMURF1Q9HCE7 757 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 DNAJB11Q9UBS4 358 aa14.17□□□□□ -0.14
VPS52-215ENST00000464425 DOCK11Q5JSL3 2073 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 IGKV1-9A0A0C4DH69 117 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 A0A1B0GW55 424 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 SULT1B1O43704 296 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 SYNGR1O43759 233 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 TFF1P04155 84 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 DUX4L2P0CJ85 424 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 DUX4L3P0CJ86 424 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 DUX4L4P0CJ87 422 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 DUX4L5P0CJ88 424 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 DUX4L6P0CJ89 424 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 DUX4L7P0CJ90 424 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 GALP22466 123 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 GLRA1P23415 457 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 RPS25P62851 125 aaKnown RBP14.16□□□□□ -0.14
VPS52-215ENST00000464425 PAX2Q02962 417 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 NEDD8Q15843 81 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 ASPHD2Q6ICH7 369 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 DUX4L9Q6RFH8 374 aaPredicted RBP14.16□□□□□ -0.14
VPS52-215ENST00000464425 ANGPTL5Q86XS5 388 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 ZNF573Q86YE8 665 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 RAB40AQ8WXH6 277 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 ZNF488Q96MN9 340 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 CKLFQ9UBR5 152 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 DUX4Q9UBX2 424 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 METRNQ9UJH8 293 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 FOXJ3Q9UPW0 622 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 AUP1Q9Y679 476 aa14.16□□□□□ -0.14
VPS52-215ENST00000464425 IGHV2-70DA0A0C4DH43 119 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 DVL1O14640 695 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 IGFBP3P17936 291 aaPredicted RBP14.15□□□□□ -0.14
VPS52-215ENST00000464425 FSTP19883 344 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 RAB3AP20336 220 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 TGFBR2P37173 567 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 RBP2P50120 134 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 NPY4RP50391 375 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 GP2P55259 537 aaKnown RBP14.15□□□□□ -0.14
VPS52-215ENST00000464425 CD200R1LQ6Q8B3 271 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 BTNL3Q6UXE8 466 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 TMEM91Q6ZNR0 172 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 CEACAM19Q7Z692 300 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 BATF2Q8N1L9 274 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 FGFRL1Q8N441 504 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 FAM216BQ8N7L0 139 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 OR13C9Q8NGT0 318 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 TMEM203Q969S6 136 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 C12orf43Q96C57 262 aaKnown RBP14.15□□□□□ -0.14
VPS52-215ENST00000464425 BORCS8Q96FH0 119 aa14.15□□□□□ -0.14
VPS52-215ENST00000464425 NUDT16L1Q9BRJ7 211 aaKnown RBP14.15□□□□□ -0.14
VPS52-215ENST00000464425 MXRA5Q9NR99 2828 aa14.14□□□□□ -0.15
VPS52-215ENST00000464425 KIR2DS1A0A191URI9 304 aa14.14□□□□□ -0.15
VPS52-215ENST00000464425 C22orf46C9J442 243 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms