RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ZNF488Q96MN9 340 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 IL4I1Q96RQ9 567 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 PPA2Q9H2U2 334 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 USE1Q9NZ43 259 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 AP4S1Q9Y587 144 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 CMYA5Q8N3K9 4069 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 H3BUX3 64 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 SULT1C4O75897 302 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 TK1P04183 234 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 KRT8P05787 483 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 OR2T7P0C7T2 308 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 HTR1FP30939 366 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 TMED1Q13445 227 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 LRRC75BQ2VPJ9 315 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 C11orf88Q6PI97 169 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 PLEKHG7Q6ZR37 379 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 MKXQ8IYA7 352 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 YIPF7Q8N8F6 280 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 DTX3Q8N9I9 347 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 OR2T27Q8NH04 317 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 C17orf50Q8WW18 174 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 UBE2FQ969M7 185 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 SSX3Q99909 188 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 RAB18Q9NP72 206 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 SLC7A11Q9UPY5 501 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 SLC22A13Q9Y226 551 aa11.69□□□□□ -0.54
SNRNP40-203ENST00000463988 A0A1W2PQL4 384 aaPredicted RBP11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 METTL15A6NJ78 407 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 K7N7A8 449 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 ATP5HO75947 161 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 GABRA5P31644 462 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 KIR2DS4P43632 304 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 ERVFRD-1P60508 538 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 CRIP3Q6Q6R5 217 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 LIAT1Q6ZQX7 453 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 SSX6Q7RTT6 188 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 CATSPERDQ86XM0 798 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 ANGPTL5Q86XS5 388 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 OR8J1Q8NGP2 316 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 CIB1Q99828 191 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 OSBPL10Q9BXB5 764 aa11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 RANBP3Q9H6Z4 567 aaPredicted RBP11.68□□□□□ -0.54
SNRNP40-203ENST00000463988 SYT7O43581 403 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 GATBO75879 557 aaKnown RBP11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 RPP14O95059 124 aaKnown RBP11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 RBP4P02753 201 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 CEBPDP49716 269 aaPredicted RBP11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 LGALS4P56470 323 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 C2orf68Q2NKX9 166 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 C1orf146Q5VVC0 180 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 AMIGO2Q86SJ2 522 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 OR4M1Q8NGD0 313 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 OR4C13Q8NGP0 309 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 RORBQ92753 470 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 RFKQ969G6 155 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 C10orf35Q96D05 121 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 GABARAPL3Q9BY60 117 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 PLEKHA1Q9HB21 404 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 SEBOXQ9HB31 216 aaPredicted RBP11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 OR14J1Q9UGF5 321 aa11.67□□□□□ -0.54
SNRNP40-203ENST00000463988 A6NIN4 97 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 FAM90A8PA6NJQ4 464 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 C17orf98A8MV24 154 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 VGLL3A8MV65 326 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 ZNF737O75373 536 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 SERPINA3P01011 423 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 CHRM2P08172 466 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 CCL3L1P16619 93 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 FUT6P51993 359 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 EFNB2P52799 333 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 DLX6P56179 175 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 ZNF273Q14593 569 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 HERPUD1Q15011 391 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 UBE2V2Q15819 145 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 PPP1R35Q8TAP8 253 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 CENPNQ96H22 339 aaPredicted RBP11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 CEP19Q96LK0 163 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 TBX5Q99593 518 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 ADI1Q9BV57 179 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 CDCA4Q9BXL8 241 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 CHST5Q9GZS9 411 aa11.66□□□□□ -0.54
SNRNP40-203ENST00000463988 FAM230AA0A1W2PPH8 454 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 TSPAN15O95858 294 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 ATP6V1E1P36543 226 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 POLR2IP36954 125 aaKnown RBP11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 ISL1P61371 349 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 COL10A1Q03692 680 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 MEF2CQ06413 473 aaPredicted RBP11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 LY6EQ16553 131 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 Q6ZTK2 550 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 ASCC1Q8N9N2 400 aaKnown RBP11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 DNAAF1Q8NEP3 725 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 OR10H4Q8NGA5 316 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 OR2T6Q8NHC8 308 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 TRMT10AQ8TBZ6 339 aaKnown RBP11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 PIFOQ8TCI5 191 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 TRUB1Q8WWH5 349 aaKnown RBP11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 PP6455Q8WZ26 134 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 EME1Q96AY2 570 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms