RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 TMED7Q9Y3B3 224 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 MMP24Q9Y5R2 645 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 HS3ST3B1Q9Y662 390 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 DSPP15924 2871 aaKnown RBP10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 A0A1W2PR48 441 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 MEIS3P1A6NDR6 274 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 A8MXE2 369 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 LDLRAD4O15165 306 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 DBIP07108 87 aaKnown RBP10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 NPSP0C0P6 89 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 CAMLGP49069 296 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 PDLIM4P50479 330 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 SLC25A1P53007 311 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 UBE2KP61086 200 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 EGR3Q06889 387 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 ARHGAP11BQ3KRB8 267 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 ULK3Q6PHR2 472 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 THNSL2Q86YJ6 484 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 SHISA5Q8N114 240 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 FRZBQ92765 325 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 FAM210BQ96KR6 192 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 FER1L6-AS2Q96M78 137 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 HIPK2Q9H2X6 1198 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 CDH20Q9HBT6 801 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 ADAP2Q9NPF8 381 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 C20orf141Q9NUB4 165 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 FRRS1LQ9P0K9 344 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 NTNG1Q9Y2I2 539 aa10.11□□□□□ -0.79
TRAPPC3-205ENST00000462715 TRAV8-7A0A075B6U6 113 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 FIGNL2A6NMB9 653 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 H3BQ15 152 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 CYB5BO43169 146 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 AMBPP02760 352 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 MAS1P04201 325 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 GUSBP08236 651 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 RPL12P30050 165 aaKnown RBP10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 NAA10P41227 235 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 RRADP55042 308 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 BTG2P78543 158 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 PMPCAQ10713 525 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 TMEM241Q24JQ0 296 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 LEG1Q6P5S2 330 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 DPY19L2P2Q6ZN68 376 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 ADGRE4PQ86SQ3 457 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 JAGN1Q8N5M9 183 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 ZNF615Q8N8J6 731 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 TMEM52Q8NDY8 209 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 NUP43Q8NFH3 380 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 ZNF563Q8TA94 476 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 CASTOR1Q8WTX7 329 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 TSLPQ969D9 159 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 P4HTMQ9NXG6 502 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 USP24Q9UPU5 2620 aa10.1□□□□□ -0.79
TRAPPC3-205ENST00000462715 LOC100509620A0A075B734 347 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 LOC102723996A0A087X1L8 192 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 IGKV3D-11A0A0A0MRZ8 115 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 ELOA3DA6NLF2 546 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 FTCDNL1E5RQL4 147 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 ABHD16AO95870 558 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 GYPBP06028 91 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 CSNK2A2P19784 350 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 FSTP19883 344 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 IDH3GP51553 393 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 PRKAG1P54619 331 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 PNRC1Q12796 327 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 PRDX4Q13162 271 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 ATP1A1-AS1Q5TC04 95 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 KIRREL2Q6UWL6 708 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 OLIG3Q7RTU3 272 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 CPEB2Q7Z5Q1 589 aaKnown RBP10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 ANKRD37Q7Z713 158 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 KCNE3Q9Y6H6 103 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 PKD1L2Q7Z442 2459 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 PTPRQQ9UMZ3 2332 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 GLOD5A6NK44 160 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 TNFSF10P50591 281 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 MMP16P51512 607 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 DEFB109BQ30KR1 87 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 ZNF774Q6NX45 483 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 SLC48A1Q6P1K1 146 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 OR1P1Q8NH06 330 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 MFSD8Q8NHS3 518 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 ADAMTS15Q8TE58 950 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 TMEM106AQ96A25 262 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 C8orf44Q96CB5 159 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 ZG16BQ96DA0 208 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 C16orf58Q96GQ5 468 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 ZNF700Q9H0M5 742 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 Q9N2J8 555 aa10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 PUS1Q9Y606 427 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRAPPC3-205ENST00000462715 NSG1A0A0A6YYJ2 146 aa10.08□□□□□ -0.8
TRAPPC3-205ENST00000462715 KCNAB3O43448 404 aa10.08□□□□□ -0.8
TRAPPC3-205ENST00000462715 LDB3O75112 727 aa10.08□□□□□ -0.8
TRAPPC3-205ENST00000462715 GPR75O95800 540 aa10.08□□□□□ -0.8
TRAPPC3-205ENST00000462715 HSPB1P04792 205 aaKnown RBP10.08□□□□□ -0.8
TRAPPC3-205ENST00000462715 IFNA6P05013 189 aa10.08□□□□□ -0.8
TRAPPC3-205ENST00000462715 EFNA3P52797 238 aa10.08□□□□□ -0.8
TRAPPC3-205ENST00000462715 ERVFRD-1P60508 538 aa10.08□□□□□ -0.8
TRAPPC3-205ENST00000462715 RBX1P62877 108 aa10.08□□□□□ -0.8
TRAPPC3-205ENST00000462715 HERPUD1Q15011 391 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms