RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 C12orf43Q96C57 262 aaKnown RBP8.9□□□□□ -0.98
USP39-210ENST00000459775 FOXRED1Q96CU9 486 aaPredicted RBP8.9□□□□□ -0.98
USP39-210ENST00000459775 POM121L2Q96KW2 1035 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 LYZL4Q96KX0 146 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 PRRT1Q99946 306 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 SLC25A15Q9Y619 301 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 C16orf97H3BN30 126 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 CCSO14618 274 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 ABCD4O14678 606 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 CLDN1O95832 211 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 THBDP07204 575 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 FAM157BP0CG42 384 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 PSMB1P20618 241 aaKnown RBP8.9□□□□□ -0.99
USP39-210ENST00000459775 UCP1P25874 307 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 CHRNB4P30926 498 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 ARR3P36575 388 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 RPL35P42766 123 aaKnown RBP8.9□□□□□ -0.99
USP39-210ENST00000459775 MMP16P51512 607 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 ERVS71-1P61550 626 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 GRB2P62993 217 aaKnown RBP8.9□□□□□ -0.99
USP39-210ENST00000459775 HLXQ14774 488 aaPredicted RBP8.9□□□□□ -0.99
USP39-210ENST00000459775 C9orf152Q5JTZ5 239 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 BCL2L15Q5TBC7 163 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 SLC30A7Q8NEW0 376 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 LINC01560Q8TB33 94 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 RPS4Y2Q8TD47 263 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 EDARADDQ8WWZ3 215 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 BSCL2Q96G97 398 aaPredicted RBP8.9□□□□□ -0.99
USP39-210ENST00000459775 WFIKKN1Q96NZ8 548 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 PPP1R3EQ9H7J1 279 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 ISYNA1Q9NPH2 558 aa8.9□□□□□ -0.99
USP39-210ENST00000459775 MYEF2Q9P2K5 600 aaKnown RBP8.9□□□□□ -0.99
USP39-210ENST00000459775 GABRPO00591 440 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 PIN1P1O15428 100 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 TNFRSF6BO95407 300 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 CECR9P0C854 216 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 PCSK6P29122 969 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 GABRA5P31644 462 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 CAV3P56539 151 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 BDH1Q02338 343 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 PLP2Q04941 152 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 KRTAP27-1Q3LI81 207 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 ACSM3Q53FZ2 586 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 CEACAM19Q7Z692 300 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 TMEM17Q86X19 198 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 COMMD2Q86X83 199 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 PGAM5Q96HS1 289 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 PIMREGQ9BSJ6 248 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 DCUN1D5Q9BTE7 237 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 TRAF4Q9BUZ4 470 aaPredicted RBP8.89□□□□□ -0.99
USP39-210ENST00000459775 DNTTIP1Q9H147 329 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 SMURF1Q9HCE7 757 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 GPR84Q9NQS5 396 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 TXNL4BQ9NX01 149 aaKnown RBP8.89□□□□□ -0.99
USP39-210ENST00000459775 USP9XQ93008 2570 aaPredicted RBP8.89□□□□□ -0.99
USP39-210ENST00000459775 IGHV1-18A0A0C4DH31 117 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 A0A1B0GTI1 187 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 IQCMA0A1B0GVH7 501 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 HELTA6NFD8 242 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 M0R1B8 84 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 NCR1O76036 304 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 GABARAPO95166 117 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 PSMA1P25786 263 aaKnown RBP8.89□□□□□ -0.99
USP39-210ENST00000459775 CALCRP30988 508 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 TAS2R43P59537 309 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 MXD1Q05195 221 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 SPANXN2Q5MJ10 180 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 WFDC8Q8IUA0 241 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 SPTSSAQ969W0 71 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 TMEM186Q96B77 213 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 R3HDM4Q96D70 268 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 ABCB10Q9NRK6 738 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 RSL24D1Q9UHA3 163 aaKnown RBP8.89□□□□□ -0.99
USP39-210ENST00000459775 STUB1Q9UNE7 303 aa8.89□□□□□ -0.99
USP39-210ENST00000459775 A0A1B0GUH1 482 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 LOC107986453A0A1B0GWG9 222 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 IGKV3-15P01624 115 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 APLNRP35414 380 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 AKR1D1P51857 326 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 GUCA2AQ02747 115 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 ZNF92Q03936 586 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 CDK10Q15131 360 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 TIMM23BQ5SRD1 257 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 GLYATL3Q5SZD4 288 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 ASPHD2Q6ICH7 369 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 TMEM108Q6UXF1 575 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 KCTD9Q7L273 389 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 ITLN2Q8WWU7 325 aaPredicted RBP8.88□□□□□ -0.99
USP39-210ENST00000459775 CHODLQ9H9P2 273 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 NOX4Q9NPH5 578 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 PGPEP1Q9NXJ5 209 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 CRIM1Q9NZV1 1036 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 DNAJB11Q9UBS4 358 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 NUFIP1Q9UHK0 495 aaKnown RBP8.88□□□□□ -0.99
USP39-210ENST00000459775 FZR1Q9UM11 496 aa8.88□□□□□ -0.99
USP39-210ENST00000459775 SCGB2A1O75556 95 aa8.87□□□□□ -0.99
USP39-210ENST00000459775 ZNF182P17025 639 aaPredicted RBP8.87□□□□□ -0.99
USP39-210ENST00000459775 ASCL1P50553 236 aa8.87□□□□□ -0.99
USP39-210ENST00000459775 CD300CQ08708 224 aa8.87□□□□□ -0.99
USP39-210ENST00000459775 ECH1Q13011 328 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms