RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ZNF774Q6NX45 483 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 BTNL8Q6UX41 500 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 SSC4DQ8WTU2 575 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 ALKBH3Q96Q83 286 aaPredicted RBP17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 ULBP2Q9BZM5 246 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 WFDC1Q9HC57 220 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 OCIAD1Q9NX40 245 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 ANXA10Q9UJ72 324 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 KLF2Q9Y5W3 355 aaPredicted RBP17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 FREM1Q5H8C1 2179 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 A0A1W2PPH5 198 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 DEDDO75618 318 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 F10P00742 488 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 LCATP04180 440 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 CCL3P10147 92 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 PRF1P14222 555 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 OR2B8PP59922 312 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 AWAT1Q58HT5 328 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 TMEM268Q5VZI3 342 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 SLC22A8Q8TCC7 542 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 RTN4IP1Q8WWV3 396 aaPredicted RBP17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 HAS2Q92819 552 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 SGK3Q96BR1 496 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 NELFAQ9H3P2 528 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 IGKV1-27A0A075B6S5 117 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 IGHV3-9P01782 118 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 NAT2P11245 290 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 LYL1P12980 280 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 CCL1P22362 96 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 CAMLGP49069 296 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 HGFACQ04756 655 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 CLINT1Q14677 625 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 SLC22A25Q6T423 547 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 PLXDC2Q6UX71 529 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 SAT2Q96F10 170 aaPredicted RBP17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 CHST5Q9GZS9 411 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 DNAJB11Q9UBS4 358 aa17.07■□□□□ 0.32
CNEP1R1-203ENST00000458059 SERPINE3A8MV23 424 aa17.06■□□□□ 0.32
CNEP1R1-203ENST00000458059 ZNF576Q9H609 170 aa17.06■□□□□ 0.32
CNEP1R1-203ENST00000458059 FOXI3A8MTJ6 420 aaPredicted RBP17.06■□□□□ 0.32
CNEP1R1-203ENST00000458059 S100A6P06703 90 aa17.06■□□□□ 0.32
CNEP1R1-203ENST00000458059 ZNF728P0DKX0 622 aa17.06■□□□□ 0.32
CNEP1R1-203ENST00000458059 B4GALT1P15291 398 aa17.06■□□□□ 0.32
CNEP1R1-203ENST00000458059 AFF3P51826 1226 aaKnown RBP17.06■□□□□ 0.32
CNEP1R1-203ENST00000458059 TGIF2Q9GZN2 237 aa17.06■□□□□ 0.32
CNEP1R1-203ENST00000458059 ACAA1P09110 424 aaPredicted RBP17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 MSX1P28360 303 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 SLC35A1P78382 337 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 TMEM156Q8N614 296 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 RGCCQ9H4X1 137 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 CHCHD2Q9Y6H1 151 aaPredicted RBP17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 HSPB6O14558 160 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 DHHO43323 396 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 CD5P06127 495 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 SRFP11831 508 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 ZNF44P15621 663 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 THBS4P35443 961 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 CACFD1Q9UGQ2 172 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 MTCH2Q9Y6C9 303 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 CEP192Q8TEP8 1941 aa17.05■□□□□ 0.32
CNEP1R1-203ENST00000458059 EIF5AP63241 154 aaKnown RBP17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 HIST3H3Q16695 136 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 ADAM5Q6NVV9 412 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 WDR74Q6RFH5 385 aaPredicted RBP17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 TMEM182Q6ZP80 229 aaPredicted RBP17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 RABEPKQ7Z6M1 372 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 FBXL14Q8N1E6 418 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 SLAMF9Q96A28 289 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 CCDC187A0A096LP49 1063 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 CRYM-AS1A6NIL9 109 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 PHF1O43189 567 aaPredicted RBP17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 JTBO76095 146 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 DVL1P1P54792 670 aaPredicted RBP17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 FAM24BQ8N5W8 94 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 NABP1Q96AH0 204 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 Q96M66 194 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 MAGT1Q9H0U3 335 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 SMCO4Q9NRQ5 59 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 C3orf80F5H4A9 247 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 GPR37O15354 613 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 RAB5BP61020 215 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 GUK1Q16774 197 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 HIST1H2BAQ96A08 127 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 CCDC74BQ96LY2 380 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 FANCFQ9NPI8 374 aa17.04■□□□□ 0.32
CNEP1R1-203ENST00000458059 IGLV3-12A0A075B6K2 115 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 A0A1W2PPE2 198 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 C7orf77A4D0Y5 90 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 SGCEO43556 437 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 ONECUT2O95948 504 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 YRDCQ86U90 279 aaKnown RBP17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 FAM213BQ8TBF2 198 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 CRLF2Q9HC73 371 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 P4HTMQ9NXG6 502 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 DKKL1Q9UK85 242 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 TAAR5O14804 337 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 PPP1CCP36873 323 aaKnown RBP17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 SLC25A53Q5H9E4 307 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 C9orf135Q5VTT2 229 aa17.03■□□□□ 0.32
CNEP1R1-203ENST00000458059 FBXW12Q6X9E4 464 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms