RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 OR14A2Q96R54 314 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 GAL3ST1Q99999 423 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 FGF23Q9GZV9 251 aaPredicted RBP7.31□□□□□ -1.24
COL28A1-205ENST00000453441 SLITRK2Q9H156 845 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 PCDHB16Q9NRJ7 776 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 MIOXQ9UGB7 285 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 CACNG2Q9Y698 323 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 IGHV4-61A0A0C4DH41 118 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 IGKV1-9A0A0C4DH69 117 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 PNMA8CA0A1B0GUJ8 204 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 TRDV1A0A1B0GX56 115 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 ISPDA4D126 451 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 A6NIN4 97 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 TRIM64CA6NLI5 447 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 CYB5R3P00387 301 aaPredicted RBP7.3□□□□□ -1.24
COL28A1-205ENST00000453441 INHBBP09529 407 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 UCHL1P09936 223 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 PGA5P0DJD9 388 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 GLRA1P23415 457 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 NPY4RP50391 375 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 PSMD7P51665 324 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 ZMYND11Q15326 602 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 KISS1Q15726 138 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 MICBQ29980 383 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 TIMM50Q3ZCQ8 353 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 HSD17B12Q53GQ0 312 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 CD200R1LQ6Q8B3 271 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 PXT1Q8NFP0 134 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 TRMT10AQ8TBZ6 339 aaKnown RBP7.3□□□□□ -1.24
COL28A1-205ENST00000453441 TMIGD2Q96BF3 282 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 MISP3Q96FF7 219 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 NRIP2Q9BQI9 281 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 TMED9Q9BVK6 235 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 WNT10AQ9GZT5 417 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 PPP1R3EQ9H7J1 279 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 SEBOXQ9HB31 216 aaPredicted RBP7.3□□□□□ -1.24
COL28A1-205ENST00000453441 TMEM165Q9HC07 324 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 TCF7L1Q9HCS4 588 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 TAS2R4Q9NYW5 299 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 TREM2Q9NZC2 230 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 KAAG1Q9UBP8 84 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 DNAJB11Q9UBS4 358 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 PCDHB10Q9UN67 800 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 ACANP16112 2415 aa7.3□□□□□ -1.24
COL28A1-205ENST00000453441 ABCA1O95477 2261 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 IGHV3-64DA0A0J9YX35 117 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 NKX6-3A6NJ46 265 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 F5H0A9 414 aaPredicted RBP7.29□□□□□ -1.24
COL28A1-205ENST00000453441 TRAPPC2LH3BP13 241 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 ZNF780AO75290 641 aaPredicted RBP7.29□□□□□ -1.24
COL28A1-205ENST00000453441 NXPH2O95156 264 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 IGHV2-5P01817 119 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 RPS2P15880 293 aaKnown RBP7.29□□□□□ -1.24
COL28A1-205ENST00000453441 JUNBP17275 347 aaPredicted RBP7.29□□□□□ -1.24
COL28A1-205ENST00000453441 ZNF93P35789 620 aaPredicted RBP7.29□□□□□ -1.24
COL28A1-205ENST00000453441 PDZK1IP1Q13113 114 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 GPR176Q14439 515 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 NEDD8Q15843 81 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 TMEM249Q2WGJ8 235 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 AVPI1Q5T686 147 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 ATPAF1Q5TC12 328 aaPredicted RBP7.29□□□□□ -1.24
COL28A1-205ENST00000453441 DDI2Q5TDH0 399 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 CYB5R2Q6BCY4 276 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 GDPGP1Q6ZNW5 385 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 ZNF826PQ6ZT77 177 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 SLC25A26Q70HW3 274 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 SLC36A1Q7Z2H8 476 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 CEACAM19Q7Z692 300 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 CALHM1Q8IU99 346 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 OR8B3Q8NGG8 313 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 OR13C5Q8NGS8 318 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 CLDND2Q8NHS1 167 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 NPRL2Q8WTW4 380 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 MUL1Q969V5 352 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 NEIL1Q96FI4 390 aaPredicted RBP7.29□□□□□ -1.24
COL28A1-205ENST00000453441 MED30Q96HR3 178 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 CEP19Q96LK0 163 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 OR8B2Q96RD0 313 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 GPER1Q99527 375 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 S100A13Q99584 98 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 UQCC2Q9BRT2 126 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 METTL17Q9H7H0 456 aaPredicted RBP7.29□□□□□ -1.24
COL28A1-205ENST00000453441 ZNF665Q9H7R5 613 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 PATZ1Q9HBE1 687 aaKnown RBP7.29□□□□□ -1.24
COL28A1-205ENST00000453441 HES4Q9HCC6 221 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 NOX4Q9NPH5 578 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 SNTG1Q9NSN8 517 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 GHRLQ9UBU3 117 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 GLS2Q9UI32 602 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 STUB1Q9UNE7 303 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 GSTK1Q9Y2Q3 226 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 SF3B6Q9Y3B4 125 aaKnown RBP7.29□□□□□ -1.24
COL28A1-205ENST00000453441 MED13LQ71F56 2210 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 HIVEP1P15822 2718 aa7.29□□□□□ -1.24
COL28A1-205ENST00000453441 CR1P17927 2039 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 CSPG4Q6UVK1 2322 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 DOCK11Q5JSL3 2073 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 IGKV1-27A0A075B6S5 117 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 TRAV1-2A0A0B4J238 106 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 PPIAL4CA0A0B4J2A2 164 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms