RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 OGG1O15527 345 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 NDUFB3O43676 98 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 GATBO75879 557 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 ATF1P18846 271 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 FPR2P25090 351 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 IL13RA1P78552 427 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 SLC34A1Q06495 639 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 DOC2BQ14184 412 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 ARMCX4Q5H9R4 360 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 ASPHD2Q6ICH7 369 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 ZNF529Q6P280 563 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 PNLDC1Q8NA58 520 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 ZNRF1Q8ND25 227 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 ZNF418Q8TF45 676 aaPredicted RBP13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 ST8SIA4Q92187 359 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 TNFRSF14Q92956 283 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 MRPL48Q96GC5 212 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 SUCNR1Q9BXA5 334 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 FKBP14Q9NWM8 211 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 CAB39Q9Y376 341 aaPredicted RBP13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 KPTNQ9Y664 436 aa13.27□□□□□ -0.29
SCAMP4-205ENST00000452128 FAM230AA0A1W2PPH8 454 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 H0YJX3 145 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 LALBAP00709 142 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 PRDX2P32119 198 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 BPIFB3P59826 476 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 ARF6P62330 175 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 IKZF1Q13422 519 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 LRRC10Q5BKY1 277 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 OR2G6Q5TZ20 316 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 C1orf122Q6ZSJ8 110 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 PARP16Q8N5Y8 322 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 SIGLECL1Q8N7X8 197 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 SETD9Q8NE22 299 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 TRMT10AQ8TBZ6 339 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 MYCBPQ99417 103 aaPredicted RBP13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 PDCD1LG2Q9BQ51 273 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 UNKLQ9H9P5 680 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 PSORS1C1Q9UIG5 152 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 SLC7A11Q9UPY5 501 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 POLDIP2Q9Y2S7 368 aa13.26□□□□□ -0.29
SCAMP4-205ENST00000452128 IGHV3OR16-10A0A075B7F0 116 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 TMEM212A6NML5 194 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 RGS9O75916 674 aaPredicted RBP13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 SERPINA3P01011 423 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 KNG1P01042 644 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 PIPP12273 146 aaPredicted RBP13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 GBX2P52951 348 aaPredicted RBP13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 SMIM21Q3B7S5 101 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 CCDC58Q4VC31 144 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 BPIFB2Q8N4F0 458 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 C11orf42Q8N5U0 333 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 KIR3DL3Q8N743 410 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 HAVCR2Q8TDQ0 301 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 NPRL2Q8WTW4 380 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 FAM216AQ8WUB2 273 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 PLEKHA1Q9HB21 404 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 BABAM2Q9NXR7 383 aa13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 SLC25A10Q9UBX3 287 aaPredicted RBP13.25□□□□□ -0.29
SCAMP4-205ENST00000452128 TRAV40A0A0B4J280 105 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 IGKV1-12A0A0C4DH73 117 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 ZNF737O75373 536 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 TOX4O94842 621 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 IGKV1D-12P01611 117 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 RPSAP08865 295 aaKnown RBP13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 PRKACBP22694 351 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 AZGP1P25311 298 aaKnown RBP13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 RBP2P50120 134 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 CDK5R1Q15078 307 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 RPL22L1Q6P5R6 122 aaKnown RBP13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 METAP1DQ6UB28 335 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 SLC25A26Q70HW3 274 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 ZNF676Q8N7Q3 588 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 OR52N1Q8NH53 320 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 OR5AK2Q8NH90 309 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 SPSB1Q96BD6 273 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 TMEM80Q96HE8 168 aa13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 CNOT2Q9NZN8 540 aaKnown RBP13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 EXOSC1Q9Y3B2 195 aaKnown RBP13.24□□□□□ -0.29
SCAMP4-205ENST00000452128 IRGMA1A4Y4 181 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 NKX6-3A6NJ46 265 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 CLDN34H7C241 214 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 XPNPEP2O43895 674 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 NXPH2O95156 264 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 CCDC159P0C7I6 412 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 GABRA2P47869 451 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 NPBWR2P48146 333 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 CEBPDP49716 269 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 RPS11P62280 158 aaKnown RBP eCLIP13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 UBA52P62987 128 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 ST3GAL4Q11206 333 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 PDZK1IP1Q13113 114 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 PDCD1Q15116 288 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 CNN3Q15417 329 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 DMKNQ6E0U4 476 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 BRD3OSQ6XYD6 125 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 C8orf59Q8N0T1 100 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 ZNF561Q8N587 486 aa13.23□□□□□ -0.29
SCAMP4-205ENST00000452128 BORCS8Q96FH0 119 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms