RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 SC5DO75845 299 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 SELEP16581 610 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 CD80P33681 288 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 GNALP38405 381 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 SEC61A1P61619 476 aaKnown RBP11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 LSM3P62310 102 aaKnown RBP11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 BLMHQ13867 455 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 UBE2V2Q15819 145 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 ZNF181Q2M3W8 571 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 GPR107Q5VW38 600 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 C22orf42Q6IC83 251 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 C9orf139Q6ZV77 190 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 MOB3CQ70IA8 216 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 C1orf87Q8N0U7 546 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 MS4A15Q8N5U1 240 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 OR51A2Q8NGJ7 313 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 OR13C9Q8NGT0 318 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 HPSE2Q8WWQ2 592 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 RAB40AQ8WXH6 277 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 MEGF10Q96KG7 1140 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 SLC30A2Q9BRI3 323 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 CENPOQ9BU64 300 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 ENPP5Q9UJA9 477 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 STUB1Q9UNE7 303 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 IGKV1-9A0A0C4DH69 117 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 TRDV1A0A1B0GX56 115 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 SHISA3A0PJX4 238 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 LRRC30A6NM36 301 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 F5H5P2 479 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 GMDSO60547 372 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 CST4P01036 141 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 NRASP01111 189 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 DDOSTP39656 456 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 GNB2P62879 340 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 PAX2Q02962 417 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 PLCXD3Q63HM9 321 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 TMEM42Q69YG0 159 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 CD200R1LQ6Q8B3 271 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 SLC16A12Q6ZSM3 486 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 PARP16Q8N5Y8 322 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 CSNK2A3Q8NEV1 391 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 TRMT10AQ8TBZ6 339 aaKnown RBP11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 UPRTQ96BW1 309 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 C1orf147Q96MC9 270 aaPredicted RBP11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 ZNF48Q96MX3 618 aaPredicted RBP11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 DUX5Q96PT3 197 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 ADAT1Q9BUB4 502 aaKnown RBP11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 SLITRK2Q9H156 845 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 UNKLQ9H9P5 680 aaKnown RBP11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 TMEM100Q9NV29 134 aa11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 TXNL4BQ9NX01 149 aaKnown RBP11.45□□□□□ -0.58
PDLIM2-213ENST00000448520 KIR2DS1A0A191URI9 304 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 SMIM30A4D0T7 59 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 DHRS7CA6NNS2 312 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 UCHL1P09936 223 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 RPS2P15880 293 aaKnown RBP11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 ATF1P18846 271 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 PSMA1P25786 263 aaKnown RBP11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 BPIFB3P59826 476 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 SLC9A3R2Q15599 337 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 OR8G1Q15617 311 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 TRAM1Q15629 374 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 CLVS2Q5SYC1 327 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 C16orf87Q6PH81 154 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 NLRC3Q7RTR2 1065 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 WDR86Q86TI4 376 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 CLVS1Q8IUQ0 354 aaPredicted RBP11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 ZDHHC23Q8IYP9 409 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 CCDC54Q8NEL0 328 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 ERGIC1Q969X5 290 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 NEIL1Q96FI4 390 aaPredicted RBP11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 SPACA5Q96QH8 159 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 CHST5Q9GZS9 411 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 ZCCHC4Q9H5U6 513 aa11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 MRPL15Q9P015 296 aaKnown RBP11.44□□□□□ -0.58
PDLIM2-213ENST00000448520 PKD1L1Q8TDX9 2849 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 IGHV2-70DA0A0C4DH43 119 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 AIREO43918 545 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 GATBO75879 557 aaKnown RBP11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 PLATP00750 562 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 SERPINA3P01011 423 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 CD2P06729 351 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 IRF2P14316 349 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 IGFBP3P17936 291 aaPredicted RBP11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 NCS1P62166 190 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 HSD17B12Q53GQ0 312 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 ZBTB37Q5TC79 503 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 PRAMEF6Q5VXH4 476 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 CELF2-AS1Q8N7Q2 184 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 DNAAF1Q8NEP3 725 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 OR1M1Q8NGA1 313 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 OR8B3Q8NGG8 313 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 ZNF420Q8TAQ5 688 aaPredicted RBP11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 OR5P3Q8WZ94 311 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 RFT1Q96AA3 541 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 ITPKCQ96DU7 683 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 OR8B2Q96RD0 313 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 TMEM246Q9BRR3 403 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 SSR3Q9UNL2 185 aa11.43□□□□□ -0.58
PDLIM2-213ENST00000448520 IGKV1-27A0A075B6S5 117 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms