RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 BTNL3Q6UXE8 466 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 ZNF841Q6ZN19 808 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 ACP7Q6ZNF0 438 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 ANGPTL5Q86XS5 388 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 CALHM1Q8IU99 346 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 MS4A15Q8N5U1 240 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 TMEM106AQ96A25 262 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 CEP19Q96LK0 163 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 NRIP2Q9BQI9 281 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 MRI1Q9BV20 369 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 WDR13Q9H1Z4 485 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 RHOFQ9HBH0 211 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 ISYNA1Q9NPH2 558 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 CKLFQ9UBR5 152 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 SIRT4Q9Y6E7 314 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-211ENST00000443563 IGKV1-27A0A075B6S5 117 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 LOC105371242A0A075B767 164 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 TRBV5-5A0A0J9YX44 114 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 KIAA1324LA8MWY0 1029 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-211ENST00000443563 DVL1O14640 695 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 ENSAO43768 121 aaKnown RBP9.02□□□□□ -0.97
HDAC6-211ENST00000443563 LIPFP07098 398 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 PSG2P11465 335 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 SRD5A1P18405 259 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 SRP14P37108 136 aaKnown RBP9.02□□□□□ -0.97
HDAC6-211ENST00000443563 GABRA2P47869 451 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 HOXA4Q00056 320 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-211ENST00000443563 GPR50Q13585 617 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 IRF3Q14653 427 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 ZNF788Q6ZQV5 615 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 SLC25A26Q70HW3 274 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 SAXO1Q8IYX7 474 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 ZFP41Q8N8Y5 198 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 PNLDC1Q8NA58 520 aaKnown RBP9.02□□□□□ -0.97
HDAC6-211ENST00000443563 OR5T2Q8NGG2 359 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 ANGPTL6Q8NI99 470 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 RAB40AQ8WXH6 277 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 RGP1Q92546 391 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-211ENST00000443563 UFD1Q92890 307 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 PGLYRP3Q96LB9 341 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 CCL13Q99616 98 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 HES4Q9HCC6 221 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 SNTG1Q9NSN8 517 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 CTSZQ9UBR2 303 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 GLS2Q9UI32 602 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 LSM2Q9Y333 95 aaKnown RBP9.02□□□□□ -0.97
HDAC6-211ENST00000443563 INSIG2Q9Y5U4 225 aa9.02□□□□□ -0.97
HDAC6-211ENST00000443563 IGHV2-70DA0A0C4DH43 119 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 PNMA8CA0A1B0GUJ8 204 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 ZNF879B4DU55 563 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 SIGLEC5O15389 551 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 GPX5O75715 221 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 PLATP00750 562 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 KNG1P01042 644 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 IFNA2P01563 188 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 ALDOBP05062 364 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 FAM157CP0CG43 387 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 POU3F4P49335 361 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 ERVK11-1P61568 191 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 PDZK1IP1Q13113 114 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 TRAM1Q15629 374 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 KISS1Q15726 138 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 ZNF529Q6P280 563 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 SVOPQ8N4V2 548 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 ZNF561Q8N587 486 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 ZSCAN4Q8NAM6 433 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-211ENST00000443563 ST8SIA4Q92187 359 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 SLAMF9Q96A28 289 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 SEH1LQ96EE3 360 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 DMRTB1Q96MA1 342 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 ZNF488Q96MN9 340 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 GPER1Q99527 375 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 NUDT16L1Q9BRJ7 211 aaKnown RBP9.01□□□□□ -0.97
HDAC6-211ENST00000443563 TMPRSS13Q9BYE2 586 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 C7orf69Q9H7B7 122 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 TMEM138Q9NPI0 162 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 TAS2R4Q9NYW5 299 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 MTCH1Q9NZJ7 389 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 AUP1Q9Y679 476 aa9.01□□□□□ -0.97
HDAC6-211ENST00000443563 IGKV1D-17A0A075B6S4 117 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 KIR2DS1A0A191URI9 304 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 RFPL4AA6NLU0 287 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 RFPL4AL1F8VTS6 287 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 PPIAL4GP0DN37 164 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
HDAC6-211ENST00000443563 FSTP19883 344 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 PSMA1P25786 263 aaKnown RBP9□□□□□ -0.97
HDAC6-211ENST00000443563 BDKRB2P30411 391 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 PRDX2P32119 198 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 BMXP51813 675 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 CAV3P56539 151 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 RPS11P62280 158 aaKnown RBP eCLIP9□□□□□ -0.97
HDAC6-211ENST00000443563 MLLT11Q13015 90 aaPredicted RBP9□□□□□ -0.97
HDAC6-211ENST00000443563 IKZF1Q13422 519 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 DOC2BQ14184 412 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 TBCEQ15813 527 aaPredicted RBP9□□□□□ -0.97
HDAC6-211ENST00000443563 BTN2A1Q7KYR7 527 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 ZNF367Q7RTV3 350 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 FAM216BQ8N7L0 139 aa9□□□□□ -0.97
HDAC6-211ENST00000443563 NANPQ8TBE9 248 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms