RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 GHSRQ92847 366 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 SEH1LQ96EE3 360 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 PGLYRP3Q96LB9 341 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 CNBD2Q96M20 576 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 CCL13Q99616 98 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 RASSF4Q9H2L5 321 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 C7orf69Q9H7B7 122 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 PAK1IP1Q9NWT1 392 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 BLOC1S6Q9UL45 172 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 NAV3Q8IVL0 2385 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 LOC105371242A0A075B767 164 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 TRBV5-5A0A0J9YX44 114 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 KIR2DS1A0A191URI9 304 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 DVL1O14640 695 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 RGS10O43665 173 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 NDUFB3O43676 98 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 ENSAO43768 121 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 NXPH2O95156 264 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 CYB5AP00167 134 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 IFNA2P01563 188 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 PSG2P11465 335 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 AMY2BP19961 511 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 GMFBP60983 142 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 IL13RA1P78552 427 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 KRTAP21-3Q3LHN1 58 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 Q499Y3 187 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 LRRC10Q5BKY1 277 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 PRSS48Q7RTY5 328 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 OR5T2Q8NGG2 359 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 OR13C9Q8NGT0 318 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 THRSPQ92748 146 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 TMEM106AQ96A25 262 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 CPNE2Q96FN4 548 aaPredicted RBP12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 CEP19Q96LK0 163 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 NUDT16L1Q9BRJ7 211 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 MRI1Q9BV20 369 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 RHOFQ9HBH0 211 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 SMURF1Q9HCE7 757 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 SNTG1Q9NSN8 517 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 ZNF222Q9UK12 451 aa12.49□□□□□ -0.41
CSNK1E-210ENST00000442216 IGKV1D-17A0A075B6S4 117 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 SIGLEC5O15389 551 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 AVPP01185 164 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 CELP19835 753 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 RAB3AP20336 220 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 SRP14P37108 136 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 CAV3P56539 151 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 SCGB2A2Q13296 93 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 GPR50Q13585 617 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 SPHARQ15513 63 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 C1orf229Q6ZS94 237 aaPredicted RBP12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 IL17RELQ6ZVW7 336 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 SLC25A26Q70HW3 274 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 C1QL2Q7Z5L3 287 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 SAXO1Q8IYX7 474 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 NANPQ8TBE9 248 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 GAFA1Q96PS6 74 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 SEBOXQ9HB31 216 aaPredicted RBP12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 MTCH1Q9NZJ7 389 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 LSM2Q9Y333 95 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 AUP1Q9Y679 476 aa12.48□□□□□ -0.41
CSNK1E-210ENST00000442216 NF1P21359 2839 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 C22orf46C9J442 243 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 MAGEB3O15480 346 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 RRP9O43818 475 aaKnown RBP12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 MRPS14O60783 128 aaKnown RBP12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 FCN3O75636 299 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 GPX5O75715 221 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 KNG1P01042 644 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 ALDOBP05062 364 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 GABRA2P47869 451 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 SOX2P48431 317 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 RPS11P62280 158 aaKnown RBP eCLIP12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 PDZK1IP1Q13113 114 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 ZNF561Q8N587 486 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 MS4A15Q8N5U1 240 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 FAM216BQ8N7L0 139 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 ZFP41Q8N8Y5 198 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 PNLDC1Q8NA58 520 aaKnown RBP12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 ZSCAN4Q8NAM6 433 aaPredicted RBP12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 ZNF488Q96MN9 340 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 ISYNA1Q9NPH2 558 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 OPN4Q9UHM6 478 aa12.47□□□□□ -0.41
CSNK1E-210ENST00000442216 DSCAML1Q8TD84 2053 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 RFPL4AA6NLU0 287 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 RFPL4AL1F8VTS6 287 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 HCKP08631 526 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 POU3F4P49335 361 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 GABARAPL2P60520 117 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 MED22Q15528 200 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 KISS1Q15726 138 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 CRIP3Q6Q6R5 217 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 FIP1L1Q6UN15 594 aaKnown RBP12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 BTN2A1Q7KYR7 527 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 C8orf46Q8TAG6 207 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 ST8SIA4Q92187 359 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 SGCDQ92629 289 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 SLAMF9Q96A28 289 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 OR5M11Q96RB7 305 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms