RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 HIST2H2BEQ16778 126 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 SLC22A6Q4U2R8 563 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.11□□□□□ -0.15
PKP4-205ENST00000426248 HIST1H2BHQ93079 126 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 HIST1H2BNQ99877 126 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 HIST1H2BMQ99879 126 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 WNK2Q9Y3S1 2297 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 ZNF823P16415 610 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 KLK2P20151 261 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 GDF1P27539 372 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 ASCL1P50553 236 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 POLR2HP52434 150 aaKnown RBP14.1□□□□□ -0.15
PKP4-205ENST00000426248 PRPS1P60891 318 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 ARG2P78540 354 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 EIF3IQ13347 325 aaKnown RBP14.1□□□□□ -0.15
PKP4-205ENST00000426248 ZNF283Q8N7M2 679 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 HAS2Q92819 552 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 RASL10BQ96S79 203 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 NIPSNAP3BQ9BS92 247 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 NDUFAF3Q9BU61 184 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 MRPS18BQ9Y676 258 aaKnown RBP14.1□□□□□ -0.15
PKP4-205ENST00000426248 FAM157CP0CG43 387 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 MOGAT2Q3SYC2 334 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 LRRC69Q6ZNQ3 347 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 GPR119Q8TDV5 335 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 DDIT4LQ96D03 193 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 RAB22AQ9UL26 194 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 CDX4O14627 284 aaPredicted RBP14.1□□□□□ -0.15
PKP4-205ENST00000426248 RAMP1O60894 148 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 IFNA21P01568 189 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 ZNF883P0CG24 379 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 TAAR8Q969N4 342 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 ESPL1Q14674 2120 aa14.1□□□□□ -0.15
PKP4-205ENST00000426248 A0A1W2PNR3 127 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 OR5I1Q13606 314 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 C1QL3Q5VWW1 255 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 APCDD1LQ8NCL9 501 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 OR4K15Q8NH41 348 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 PGA4P0DJD7 388 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 PGA5P0DJD9 388 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 GLI4P10075 376 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 CD200P41217 278 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 POU3F1Q03052 451 aaPredicted RBP14.09□□□□□ -0.15
PKP4-205ENST00000426248 PPA1Q15181 289 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 GRINAQ7Z429 371 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 NECAP1Q8NC96 275 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 KTI12Q96EK9 354 aaPredicted RBP14.09□□□□□ -0.15
PKP4-205ENST00000426248 PLA2G3Q9NZ20 509 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 HS3ST3B1Q9Y662 390 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 VPS13AQ96RL7 3174 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 ADAMTS9Q9P2N4 1935 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 A0A1B0GTI1 187 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 B4E171 279 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 JTBO76095 146 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 IGKV3-11P04433 115 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 ZBTB25P24278 435 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 S100A7P31151 101 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 TSPAN7P41732 249 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 CX3CR1P49238 355 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 DIO1P49895 249 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 YRDCQ86U90 279 aaKnown RBP14.09□□□□□ -0.15
PKP4-205ENST00000426248 SLC35G3Q8N808 338 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 OR13C8Q8NGS7 320 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 RAB24Q969Q5 203 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 FAM210BQ96KR6 192 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 SLC22A13Q9Y226 551 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 IGKV3D-11A0A0A0MRZ8 115 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 ALG1L2C9J202 215 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 RAB27BO00194 218 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 RBMXL2O75526 392 aaKnown RBP14.09□□□□□ -0.15
PKP4-205ENST00000426248 NPSP0C0P6 89 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 GALNSP34059 522 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 C1orf140Q5VVS0 124 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 PRSS54Q6PEW0 395 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 C1orf87Q8N0U7 546 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 GPX8Q8TED1 209 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 GPR87Q9BY21 358 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 TMEM100Q9NV29 134 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 FOXJ2Q9P0K8 574 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 LRFN1Q9P244 771 aa14.09□□□□□ -0.15
PKP4-205ENST00000426248 ELOA3CA0A087WX78 387 aaPredicted RBP14.08□□□□□ -0.16
PKP4-205ENST00000426248 NTN3O00634 580 aaPredicted RBP14.08□□□□□ -0.16
PKP4-205ENST00000426248 ZFP36L1Q07352 338 aaKnown RBP14.08□□□□□ -0.16
PKP4-205ENST00000426248 SLC25A42Q86VD7 318 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 MCEMP1Q8IX19 187 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 ZNF587Q96SQ5 575 aaPredicted RBP14.08□□□□□ -0.16
PKP4-205ENST00000426248 EGLN1Q9GZT9 426 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 PARP11Q9NR21 331 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 C19orf12Q9NSK7 152 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 RCL1Q9Y2P8 373 aaKnown RBP14.08□□□□□ -0.16
PKP4-205ENST00000426248 PKDREJQ9NTG1 2253 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 A0A087WUJ7 227 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 H0YIZ8 118 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 CST4P01036 141 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 CD5P06127 495 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 MESTQ5EB52 335 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 ADIPOR1Q96A54 375 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 IFITM10A6NMD0 228 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 A8MVM7 634 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 PRR33A8MZF0 331 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms