RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 SPSB2Q99619 263 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 SPACA1Q9HBV2 294 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 EDARQ9UNE0 448 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 STARD10Q9Y365 291 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 CCDC187A0A096LP49 1063 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 ZNHIT1O43257 154 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 SCRG1O75711 98 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 JTBO76095 146 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 APOC1P02654 83 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 CTSDP07339 412 aaPredicted RBP12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 SNCAP37840 140 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 CSNK1A1P48729 337 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 PIGYQ3MUY2 71 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 EIF5AL1Q6IS14 154 aaKnown RBP12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 ADPRHL1Q8NDY3 354 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 OR5L1Q8NGL2 311 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 SLC39A7Q92504 469 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 EGLN1Q9GZT9 426 aa12.36□□□□□ -0.43
TPM3P9-201ENST00000424846 IGLV3-32A0A0A0MS00 114 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 CCDC85CA6NKD9 419 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 M0R135 149 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 DKK1O94907 266 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 TSPAN15O95858 294 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 PTAFRP25105 342 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 MTCP1P56278 107 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 SURF2Q15527 256 aaPredicted RBP12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 KRBOX4Q5JUW0 171 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 SKA3Q8IX90 412 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 HSD17B11Q8NBQ5 300 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 ZNF799Q96GE5 643 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 PLEK2Q9NYT0 353 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 ATPIF1Q9UII2 106 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 CHCHD2Q9Y6H1 151 aaPredicted RBP12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 CACNA1EQ15878 2313 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 C5orf52A6NGY3 159 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 ZNF850A8MQ14 1090 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 PRSS44E7EML9 344 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 ZFAND5O76080 213 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 CTSSP25774 331 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 MSX1P28360 303 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 TMEM187Q14656 261 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 GUK1Q16774 197 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 HPSE2Q8WWQ2 592 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 SPACA9Q96E40 222 aaPredicted RBP12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 GPHA2Q96T91 129 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 FBXO7Q9Y3I1 522 aa12.35□□□□□ -0.43
TPM3P9-201ENST00000424846 IGKV1-12A0A0C4DH73 117 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 IGKV1D-12P01611 117 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 GAPDHP04406 335 aaKnown RBP12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 NTF4P34130 210 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 PPP1CCP36873 323 aaKnown RBP12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 PLXDC2Q6UX71 529 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 UBAC2Q8NBM4 344 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 NELFAQ9H3P2 528 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 A0A0U1RQV5 110 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 A0A1W2PPE2 198 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 M0R036 132 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 GEMIN2O14893 280 aaKnown RBP12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 RAB5BP61020 215 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 EIF5AP63241 154 aaKnown RBP12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 H3F3AP84243 136 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 FAM3AP98173 230 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 SMCO1Q147U7 214 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 EIF2S3LQ2VIR3 472 aaKnown RBP12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 NSUN5P2Q63ZY6 315 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 GUSBP11Q6P575 273 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 GJC3Q8NFK1 279 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 RTN4IP1Q8WWV3 396 aaPredicted RBP12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 ABHD14AQ9BUJ0 271 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 EIF5A2Q9GZV4 153 aaKnown RBP12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 FSCN3Q9NQT6 498 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 IFNA21P01568 189 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 IFNA4P05014 189 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 FOLR2P14207 255 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 OTX1P32242 354 aaPredicted RBP12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 SHBQ15464 509 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 WDR74Q6RFH5 385 aaPredicted RBP12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 OPN5Q6U736 354 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 FAM24BQ8N5W8 94 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 FADS6Q8N9I5 356 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 OR5L2Q8NGL0 311 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 DECR2Q9NUI1 292 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 GHRLQ9UBU3 117 aa12.34□□□□□ -0.43
TPM3P9-201ENST00000424846 ZNF407Q9C0G0 2248 aa12.33□□□□□ -0.43
TPM3P9-201ENST00000424846 A0A1W2PQM1 296 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 RRP8O43159 456 aaKnown RBP12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 DANCRP0C864 163 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 PI4KAP42356 2102 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 LSM6P62312 80 aaKnown RBP12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 C15orf54Q8N8G6 183 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 PP6455Q8WZ26 134 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 DEFB126Q9BYW3 111 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 ARV1Q9H2C2 271 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 C1orf196B1AJZ1 125 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 SGCEO43556 437 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 OR13C7P0DN81 318 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 OR2B8PP59922 312 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 RAB30Q15771 203 aa12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 ZNF385CQ66K41 422 aaPredicted RBP12.33□□□□□ -0.44
TPM3P9-201ENST00000424846 RABEPKQ7Z6M1 372 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms