RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 DTX3Q8N9I9 347 aa15.04■□□□□ -0
VPS16-204ENST00000417508 RFKQ969G6 155 aa15.04■□□□□ -0
VPS16-204ENST00000417508 C10orf35Q96D05 121 aa15.04■□□□□ -0
VPS16-204ENST00000417508 ADI1Q9BV57 179 aa15.04■□□□□ -0
VPS16-204ENST00000417508 C19orf12Q9NSK7 152 aa15.04■□□□□ -0
VPS16-204ENST00000417508 USE1Q9NZ43 259 aa15.04■□□□□ -0
VPS16-204ENST00000417508 A0A1W2PQL4 384 aaPredicted RBP15.03■□□□□ -0
VPS16-204ENST00000417508 ANKRD61A6NGH8 418 aa15.03■□□□□ -0
VPS16-204ENST00000417508 ANGPTL7O43827 346 aa15.03■□□□□ -0
VPS16-204ENST00000417508 RPP14O95059 124 aaKnown RBP15.03■□□□□ -0
VPS16-204ENST00000417508 SERPINA3P01011 423 aa15.03■□□□□ -0
VPS16-204ENST00000417508 ERVK11-1P61568 191 aa15.03■□□□□ -0
VPS16-204ENST00000417508 PRB3Q04118 309 aaPredicted RBP15.03■□□□□ -0
VPS16-204ENST00000417508 TMEM200BQ69YZ2 307 aa15.03■□□□□ -0
VPS16-204ENST00000417508 PLEKHG7Q6ZR37 379 aa15.03■□□□□ -0
VPS16-204ENST00000417508 PNKDQ8N490 385 aa15.03■□□□□ -0
VPS16-204ENST00000417508 TRUB1Q8WWH5 349 aaKnown RBP15.03■□□□□ -0
VPS16-204ENST00000417508 ZNF488Q96MN9 340 aa15.03■□□□□ -0
VPS16-204ENST00000417508 GABARAPL3Q9BY60 117 aa15.03■□□□□ -0
VPS16-204ENST00000417508 PLEKHA1Q9HB21 404 aa15.03■□□□□ -0
VPS16-204ENST00000417508 SYT7O43581 403 aa15.02■□□□□ -0
VPS16-204ENST00000417508 GATBO75879 557 aaKnown RBP15.02■□□□□ -0
VPS16-204ENST00000417508 TK1P04183 234 aa15.02■□□□□ -0
VPS16-204ENST00000417508 CHRM2P08172 466 aa15.02■□□□□ -0
VPS16-204ENST00000417508 FUT6P51993 359 aa15.02■□□□□ -0
VPS16-204ENST00000417508 ASPHD2Q6ICH7 369 aa15.02■□□□□ -0
VPS16-204ENST00000417508 SSX6Q7RTT6 188 aa15.02■□□□□ -0
VPS16-204ENST00000417508 MKXQ8IYA7 352 aa15.02■□□□□ -0
VPS16-204ENST00000417508 C11orf42Q8N5U0 333 aa15.02■□□□□ -0
VPS16-204ENST00000417508 RORBQ92753 470 aa15.02■□□□□ -0
VPS16-204ENST00000417508 TBX5Q99593 518 aa15.02■□□□□ -0
VPS16-204ENST00000417508 SSX3Q99909 188 aa15.02■□□□□ -0
VPS16-204ENST00000417508 RBM4BQ9BQ04 359 aaKnown RBP15.02■□□□□ -0
VPS16-204ENST00000417508 MMP27Q9H306 513 aa15.02■□□□□ -0
VPS16-204ENST00000417508 SEBOXQ9HB31 216 aaPredicted RBP15.02■□□□□ -0
VPS16-204ENST00000417508 TCF7L1Q9HCS4 588 aa15.02■□□□□ -0
VPS16-204ENST00000417508 FBLN5Q9UBX5 448 aa15.02■□□□□ -0
VPS16-204ENST00000417508 K7N7A8 449 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 CIB2O75838 187 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 POLR2IP36954 125 aaKnown RBP15.01□□□□□ -0.01
VPS16-204ENST00000417508 LGALS4P56470 323 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 KRTAP10-3P60369 221 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 ERVFRD-1P60508 538 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 CDC42P60953 191 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 KCTD20Q7Z5Y7 419 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 ANGPTL5Q86XS5 388 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 OR10H4Q8NGA5 316 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 EME1Q96AY2 570 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 RAB18Q9NP72 206 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 OR14J1Q9UGF5 321 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 OAZ3Q9UMX2 235 aa15.01□□□□□ -0.01
VPS16-204ENST00000417508 FAM230AA0A1W2PPH8 454 aa15□□□□□ -0.01
VPS16-204ENST00000417508 A6NIN4 97 aa15□□□□□ -0.01
VPS16-204ENST00000417508 H3BUX3 64 aa15□□□□□ -0.01
VPS16-204ENST00000417508 KCNAB3O43448 404 aa15□□□□□ -0.01
VPS16-204ENST00000417508 UBE2V2Q15819 145 aa15□□□□□ -0.01
VPS16-204ENST00000417508 LRRC75BQ2VPJ9 315 aa15□□□□□ -0.01
VPS16-204ENST00000417508 SLC35E4Q6ICL7 350 aa15□□□□□ -0.01
VPS16-204ENST00000417508 C11orf88Q6PI97 169 aa15□□□□□ -0.01
VPS16-204ENST00000417508 PP6455Q8WZ26 134 aa15□□□□□ -0.01
VPS16-204ENST00000417508 AJUBAQ96IF1 538 aa15□□□□□ -0.01
VPS16-204ENST00000417508 CEP19Q96LK0 163 aa15□□□□□ -0.01
VPS16-204ENST00000417508 PPA2Q9H2U2 334 aa15□□□□□ -0.01
VPS16-204ENST00000417508 RIBC2Q9H4K1 309 aa15□□□□□ -0.01
VPS16-204ENST00000417508 NOTCH1P46531 2555 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 DSCAML1Q8TD84 2053 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 C17orf98A8MV24 154 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 RBP4P02753 201 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 UBCP0CG48 685 aaKnown RBP14.99□□□□□ -0.01
VPS16-204ENST00000417508 KIR2DS4P43632 304 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 DEFA6Q01524 100 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 ODF4Q2M2E3 257 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 SLC25A30Q5SVS4 291 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 LIAT1Q6ZQX7 453 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 FAM220AQ7Z4H9 259 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 Q8IYB0 196 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 DNAAF1Q8NEP3 725 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 OR4M1Q8NGD0 313 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 TRMT10AQ8TBZ6 339 aaKnown RBP14.99□□□□□ -0.01
VPS16-204ENST00000417508 CHST5Q9GZS9 411 aa14.99□□□□□ -0.01
VPS16-204ENST00000417508 GABRA5P31644 462 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 CEBPDP49716 269 aaPredicted RBP14.98□□□□□ -0.01
VPS16-204ENST00000417508 ISL1P61371 349 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 COL10A1Q03692 680 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 MEF2CQ06413 473 aaPredicted RBP14.98□□□□□ -0.01
VPS16-204ENST00000417508 CNN3Q15417 329 aaKnown RBP14.98□□□□□ -0.01
VPS16-204ENST00000417508 TMEM244Q5VVB8 128 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 EGFL6Q8IUX8 553 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 ENTHD1Q8IYW4 607 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 C17orf50Q8WW18 174 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 UBE2FQ969M7 185 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 BORCS8Q96FH0 119 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 SNX22Q96L94 193 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 RANBP3Q9H6Z4 567 aaPredicted RBP14.98□□□□□ -0.01
VPS16-204ENST00000417508 IMPAD1Q9NX62 359 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 MTCH1Q9NZJ7 389 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 GNG8Q9UK08 70 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 ORC6Q9Y5N6 252 aa14.98□□□□□ -0.01
VPS16-204ENST00000417508 FAM90A8PA6NJQ4 464 aa14.97□□□□□ -0.01
VPS16-204ENST00000417508 SNTNA6NMZ2 147 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms