RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 MEMO1Q9Y316 297 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 WIF1Q9Y5W5 379 aa3.05□□□□□ -1.92
HMGB3P23-201ENST00000414981 COL4A5P29400 1685 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OTOFQ9HC10 1997 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 GREB1Q4ZG55 1949 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TRAV19A0A0A6YYK7 116 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 A0A1B0GUS0 222 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 A0A1W2PPV9 198 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMEM213A2RRL7 107 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SMCO3A2RU48 225 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TRABD2BA6NFA1 517 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 C15orf61A6NNL5 157 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 C5orf58C9J3I9 102 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 MCRIP1C9JLW8 97 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 F8W036 122 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 GABARAPH6UMI1 98 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 J3QRE1 110 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CCSO14618 274 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 IMPA2O14732 288 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 PDCD5O14737 125 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 FFAR1O14842 300 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR10H3O60404 316 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CREBL2O60519 120 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TSPAN2O60636 221 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 RDH16O75452 317 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR2J3O76001 311 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 DUS4LO95620 317 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CPSF4O95639 269 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 F10P00742 488 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 IGHV2-70P01814 119 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CATP04040 527 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SFTPBP07988 381 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 RHOCP08134 193 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ADRA2AP08913 450 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 NMBP08949 121 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF286BP0CG31 522 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 UBBP0CG47 229 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 LIMS3P0CW19 117 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 LIMS4P0CW20 117 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 IFI30P13284 250 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ICAM2P13598 275 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 IRF2P14316 349 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 GATA1P15976 413 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 EPCAMP16422 314 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 MGMTP16455 207 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ELK1P19419 428 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 FCARP24071 287 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SHC1P29353 583 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 FAUP35544 74 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ACVR1BP36896 505 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CD79BP40259 229 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 RAB13P51153 203 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ATP1B3P54709 279 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 PAX9P55771 341 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 PFN3P60673 137 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SNRPD2P62316 118 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ARF6P62330 175 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 RPS25P62851 125 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 RPS27AP62979 156 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 UBA52P62987 128 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 HBA1P69905 142 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 MRPS6P82932 125 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CNTN1Q12860 1018 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ELAVL2Q12926 359 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TAF10Q12962 218 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 BTN1A1Q13410 526 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CDH18Q13634 790 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 GRB14Q14449 540 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF345Q14585 488 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 GINS1Q14691 196 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 IRF4Q15306 451 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CDKN3Q16667 212 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 BCL2L15Q5TBC7 163 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OLFML2AQ68BL7 652 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 LPCAT3Q6P1A2 487 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 MED27Q6P2C8 311 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SFXN4Q6P4A7 337 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SMARCD3Q6STE5 483 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF322Q6U7Q0 402 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMEM64Q6YI46 380 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 MOB2Q70IA6 237 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 DPY19L4Q7Z388 723 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 LHFPL3Q86UP9 236 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CACUL1Q86Y37 369 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 MARCH9Q86YJ5 346 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SKA3Q8IX90 412 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CLECL1Q8IZS7 167 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SVBPQ8N300 66 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 FTMTQ8N4E7 242 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ACBD7Q8N6N7 88 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 DCAF4L2Q8NA75 395 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 MFSD9Q8NBP5 474 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 GPR26Q8NDV2 337 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR1M1Q8NGA1 313 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR11H4Q8NGC9 324 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR2AP1Q8NGE2 309 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR6M1Q8NGM8 313 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR8D4Q8NGM9 314 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR4D5Q8NGN0 318 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR10Q1Q8NGQ4 319 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 423.8 ms