RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 IFITM5A6NNB3 132 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 H7BYZ3 331 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 TRAF3IP2O43734 574 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 SLC22A5O76082 557 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 CNIH1O95406 144 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 CNOT4O95628 575 aaKnown RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 HEXAP06865 529 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 GRPP07492 148 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 CPN1P15169 458 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 ZNF708P17019 499 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 NTF3P20783 257 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 CEBPDP49716 269 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 FUT6P51993 359 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 SNRPD2P62316 118 aaKnown RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 EGR4Q05215 589 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 SSX1Q16384 188 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 TEX30Q5JUR7 227 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 TMUB2Q71RG4 321 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 PLPP7Q8NBV4 271 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 OR5D18Q8NGL1 313 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 RAB3CQ96E17 227 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 KCNK17Q96T54 332 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 CYSLTR2Q9NS75 346 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 RHBDD3Q9Y3P4 386 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 PTPRQQ9UMZ3 2332 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 PLXNB3Q9ULL4 1909 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 H7C417 338 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 DHRS3O75911 302 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 IGHMP01871 453 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 PAX6P26367 422 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 SNRPNP63162 240 aaKnown RBP7.5□□□□□ -1.21
SYNE1-211ENST00000413186 GK2Q14410 553 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-211ENST00000413186 KCNJ8Q15842 424 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 TBR1Q16650 682 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 SOWAHCQ53LP3 525 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-211ENST00000413186 OTPQ5XKR4 325 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 LINC00114Q6XXX2 140 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 GDPD3Q7L5L3 318 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 MFSD4AQ8N468 514 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 CMSS1Q9BQ75 279 aaKnown RBP7.5□□□□□ -1.21
SYNE1-211ENST00000413186 C11orf68Q9H3H3 251 aaKnown RBP7.5□□□□□ -1.21
SYNE1-211ENST00000413186 PLK3Q9H4B4 646 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 SLC7A10Q9NS82 523 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 COX11Q9Y6N1 276 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 UPK3AO75631 287 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 CD1AP06126 327 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 LPLP06858 475 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 PGA4P0DJD7 388 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 PGA3P0DJD8 388 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 ELK1P19419 428 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 IL11P20809 199 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 PPOXP50336 477 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 RPS4XP62701 263 aaKnown RBP7.5□□□□□ -1.21
SYNE1-211ENST00000413186 PLA2G7Q13093 441 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 GGTLC2Q14390 218 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 IGSF11Q5DX21 431 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 WDR38Q5JTN6 314 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 H3F3CQ6NXT2 135 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 RDH10Q8IZV5 341 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 CADM3Q8N126 398 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 DTX3Q8N9I9 347 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 RNF133Q8WVZ7 376 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 SLC7A6Q92536 515 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 TMEM45BQ96B21 275 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 GPR137Q96N19 417 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 OR2H1Q9GZK4 316 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 RAB18Q9NP72 206 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 MSTNO14793 375 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 ATG12O94817 140 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 AGFG2O95081 481 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 BLVRBP30043 206 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-211ENST00000413186 RBM11P57052 281 aaKnown RBP7.5□□□□□ -1.21
SYNE1-211ENST00000413186 TUSC1Q2TAM9 212 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 CST9LP1Q5W188 147 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 SIGLECL1Q8N7X8 197 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 TPPP3Q9BW30 176 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 RNF167Q9H6Y7 350 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 FOXD3Q9UJU5 478 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-211ENST00000413186 MPZL1O95297 269 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 TBPP20226 339 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 DCTDP32321 178 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 THBS3P49746 956 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 RAG2P55895 527 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 AKR1C1Q04828 323 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 OR8B8Q15620 311 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 LPCAT3Q6P1A2 487 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 SLC25A47Q6Q0C1 308 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 FAM57AQ8TBR7 257 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 ZFAND1Q8TCF1 268 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 C10orf35Q96D05 121 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 SPIN2AQ99865 258 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 SLC6A7Q99884 636 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 SPIN2BQ9BPZ2 258 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 LINC00470Q9BZP3 86 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 MRPL15Q9P015 296 aaKnown RBP7.5□□□□□ -1.21
SYNE1-211ENST00000413186 SSUH2Q9Y2M2 353 aa7.5□□□□□ -1.21
SYNE1-211ENST00000413186 hCG_1809904A0A1W2PP81 198 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 A0A1W2PPE2 198 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 A0A1W2PR64 198 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 A0A1W2PRV1 198 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms