RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 DCCP43146 1447 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRAV8-2A0A0B4J237 113 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 HYKKA2RU49 373 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 F5H5P2 479 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 H3BML4 177 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 SYS1-DBNDD2H3BUS1 97 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 K7ERS5 55 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 SULT1C2O00338 296 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 SDCBPO00560 298 aaPredicted RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 AGPAT2O15120 278 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 ARPC2O15144 300 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 TCAPO15273 167 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 TSPAN6O43657 245 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 ASNA1O43681 348 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CREB3O43889 395 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 NDUFS5O43920 106 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 BCE1O60756 84 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 DKC1O60832 514 aaKnown RBP eCLIP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC22A5O76082 557 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 FGF19O95750 216 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 SOD1P00441 154 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 IL6P05231 212 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 RPL17P18621 184 aaKnown RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 EVI2AP22794 236 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 ATP5A1P25705 553 aaKnown RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CTNNA2P26232 953 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CD200P41217 278 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 MAP3K8P41279 467 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CASP3P42574 277 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 LPAR6P43657 344 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 PAPOLAP51003 745 aaKnown RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 BACE1P56817 501 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 DYNLL1P63167 89 aaKnown RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 IFI35P80217 286 aaPredicted RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 ART3Q13508 389 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CAMK2DQ13557 499 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 PHKG1Q16816 387 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 PHYHD1Q5SRE7 291 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CCDC30Q5VVM6 783 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 XAF1Q6GPH4 301 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRIM40Q6P9F5 258 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 MOB2Q70IA6 237 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 GLRX5Q86SX6 157 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 SRLQ86TD4 932 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 OOSP2Q86WS3 158 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 PEX5LQ8IYB4 626 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 DIS3L2Q8IYB7 885 aaKnown RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CENPLQ8N0S6 344 aaPredicted RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 LGI2Q8N0V4 545 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 SIX6OS1Q8N1H7 587 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR8B3Q8NGG8 313 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR1J2Q8NGS2 313 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR4F5Q8NH21 305 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 ST8SIA1Q92185 356 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 KCNJ9Q92806 393 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CDS1Q92903 461 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 KIF1BPQ96EK5 621 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CARD19Q96LW7 228 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 Q96MT0 163 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 TSPAN18Q96SJ8 248 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 HSD17B10Q99714 261 aaKnown RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC35A5Q9BS91 424 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 PCGF1Q9BSM1 259 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CCDC106Q9BWC9 280 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CHID1Q9BWS9 393 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 B3GNT5Q9BYG0 378 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 GSDMCQ9BYG8 508 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC25A32Q9H2D1 315 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 NOL11Q9H8H0 719 aaKnown RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CAB39LQ9H9S4 337 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 C14orf105Q9NVL8 296 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CRIPTQ9P021 101 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 STX18Q9P2W9 335 aaKnown RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 HSPB7Q9UBY9 170 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 ANAPC2Q9UJX6 822 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 NOL7Q9UMY1 257 aaKnown RBP-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 PLA2G4CQ9UP65 541 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 AP3M1Q9Y2T2 418 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 GTF3C3Q9Y5Q9 886 aa-2.3□□□□□ -2.78
RNU4-88P-201ENST00000411220 CUX1P39880 1505 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 PTPRMP28827 1452 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 GAPVD1Q14C86 1478 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 A0A0D9SEW6 157 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 MMP24-AS1A0A0U1RRL7 71 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 A6NIZ1 184 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 A8MWP6 167 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SEC14L6B5MCN3 397 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 C11orf98E9PRG8 122 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 RAB27BO00194 218 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 CPLX1O14810 134 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 ACOX3O15254 700 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 CCL16O15467 120 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 GATCO43716 136 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 KIAA0513O60268 411 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 FADS1O60427 444 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 RASSF9O75901 435 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 KCNK5O95279 499 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 NDST3O95803 873 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 ADAP00813 363 aa-2.31□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms