RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 SNTG1Q9NSN8 517 aa12.68□□□□□ -0.38
SNRNP27-202ENST00000409116 SHISA3A0PJX4 238 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 OOEPA6NGQ2 149 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 NOS1APO75052 506 aaPredicted RBP12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 NXPH2O95156 264 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 CYB5AP00167 134 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 TFF1P04155 84 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 CALCBP10092 127 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 BCL3P20749 454 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 USF1P22415 310 aaPredicted RBP12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 GLRA1P23415 457 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 MYL9P24844 172 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 FGF9P31371 208 aaPredicted RBP12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 MDH2P40926 338 aaKnown RBP12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 PTGFRP43088 359 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 FAM90A1Q86YD7 464 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 NKAIN3Q8N8D7 197 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 OR5T2Q8NGG2 359 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 CLDND2Q8NHS1 167 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 GFI1Q99684 422 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 TMEM246Q9BRR3 403 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 CENPOQ9BU64 300 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 FUNDC2Q9BWH2 189 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 CNTD2Q9H8S5 307 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 ELL3Q9HB65 397 aaPredicted RBP12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 TMEM165Q9HC07 324 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 RBFOX1Q9NWB1 397 aaKnown RBP12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 DNAJB11Q9UBS4 358 aa12.67□□□□□ -0.38
SNRNP27-202ENST00000409116 MEGF11A6BM72 1044 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 TRAPPC2LH3BP13 241 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 SMAD7O15105 426 aaKnown RBP12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 AIREO43918 545 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 GYPAP02724 150 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 IL2RGP31785 369 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 ERVK11-1P61568 191 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 LSM3P62310 102 aaKnown RBP12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 ZNF404Q494X3 552 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 TEX36Q5VZQ5 186 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 SPNS3Q6ZMD2 512 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 ACP7Q6ZNF0 438 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 LYPD6Q86Y78 171 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 OR4D6Q8NGJ1 314 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 SMURF1Q9HCE7 757 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 IL36RNQ9UBH0 155 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 SCOCQ9UIL1 159 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 GSTK1Q9Y2Q3 226 aa12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 AK6Q9Y3D8 172 aaKnown RBP12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 ZNF469Q96JG9 3925 aaPredicted RBP12.66□□□□□ -0.38
SNRNP27-202ENST00000409116 TRAV1-2A0A0B4J238 106 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 TRAV38-1A0A0B4J264 116 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 SMIM30A4D0T7 59 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 CEACAM18A8MTB9 384 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 CDRT1O95170 752 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 ACAA1P09110 424 aaPredicted RBP12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 TGFBR1P36897 503 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 OR10A3P58181 314 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 LMO4P61968 165 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 MICBQ29980 383 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 SMIM21Q3B7S5 101 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 TIMM50Q3ZCQ8 353 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 TMEM155Q4W5P6 130 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 LYPD2Q6UXB3 125 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 GPR141Q7Z602 305 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 SAXO1Q8IYX7 474 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 MUC20Q8N307 709 aaPredicted RBP12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 PNLDC1Q8NA58 520 aaKnown RBP12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 ZSCAN4Q8NAM6 433 aaPredicted RBP12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 OR10K1Q8NGX5 313 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 EMG1Q92979 244 aaKnown RBP12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 NAA50Q9GZZ1 169 aaKnown RBP12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 HES4Q9HCC6 221 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 NLKQ9UBE8 527 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 ING4Q9UNL4 249 aa12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 MRPS28Q9Y2Q9 187 aaKnown RBP12.65□□□□□ -0.38
SNRNP27-202ENST00000409116 OR2AT4A6NND4 320 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 KDM4BO94953 1096 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 FSTL3O95633 263 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 IGHV2-5P01817 119 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 SFTPBP07988 381 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 PSG2P11465 335 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 MUC1P15941 1255 aaPredicted RBP12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 PRKACAP17612 351 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 CEBPDP49716 269 aaPredicted RBP12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 SNU13P55769 128 aaKnown RBP12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 LOXL1Q08397 574 aaPredicted RBP12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 RSU1Q15404 277 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 GPR107Q5VW38 600 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 GLT8D1Q68CQ7 371 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 STUMQ69YW2 141 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 SLC16A12Q6ZSM3 486 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 CDH26Q8IXH8 852 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 SPICQ8N5J4 248 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 PXT1Q8NFP0 134 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 KCTD7Q96MP8 289 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 CCL13Q99616 98 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 UQCC2Q9BRT2 126 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 ZNF665Q9H7R5 613 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 RASL12Q9NYN1 266 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 PCDHB10Q9UN67 800 aa12.64□□□□□ -0.39
SNRNP27-202ENST00000409116 ACANP16112 2415 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms