RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 OR5V1Q9UGF6 321 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 FGF7P21781 194 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 OR2M7Q8NG81 312 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 LRRC29Q8WV35 223 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 RPP25Q9BUL9 199 aaKnown RBP13.87□□□□□ -0.19
GNE-202ENST00000396594 GHITMQ9H3K2 345 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 ZNF665Q9H7R5 613 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 RASL12Q9NYN1 266 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 MAGEB4O15481 346 aaPredicted RBP13.87□□□□□ -0.19
GNE-202ENST00000396594 AGFG1P52594 562 aaKnown RBP13.87□□□□□ -0.19
GNE-202ENST00000396594 METAP1P53582 386 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 DOLPP1Q86YN1 238 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 OR13D1Q8NGV5 346 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 OR5B3Q8NH48 314 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 A0A1B0GTL3 188 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 M0R1X1 148 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 SDCBPO00560 298 aaPredicted RBP13.86□□□□□ -0.19
GNE-202ENST00000396594 SP1P08047 785 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 OR5G3P0C626 314 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 GNB1P62873 340 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 TMEM267Q0VDI3 215 aaPredicted RBP13.86□□□□□ -0.19
GNE-202ENST00000396594 TESK1Q15569 626 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 DCAF10Q5QP82 559 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 C1orf185Q5T7R7 199 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 FAM109BQ6ICB4 259 aaPredicted RBP13.86□□□□□ -0.19
GNE-202ENST00000396594 STXBP6Q8NFX7 210 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 FBXO17Q96EF6 278 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 NDUFA2O43678 99 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 ZNF239Q16600 458 aaKnown RBP13.86□□□□□ -0.19
GNE-202ENST00000396594 ANGPTL4Q9BY76 406 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 A0A0U1RQV5 110 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 ANKRD20A5PA0PJZ0 165 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 RAB27BO00194 218 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 PDGFBP01127 241 aaPredicted RBP13.86□□□□□ -0.19
GNE-202ENST00000396594 PTHLHP12272 177 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 RHOBP62745 196 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 B3GNTL1Q67FW5 361 aaPredicted RBP13.86□□□□□ -0.19
GNE-202ENST00000396594 DPPA3Q6W0C5 159 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 HSD17B10Q99714 261 aaKnown RBP13.86□□□□□ -0.19
GNE-202ENST00000396594 TMEM167BQ9NRX6 74 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 TMEM38BQ9NVV0 291 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 PRNDQ9UKY0 176 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 STARD10Q9Y365 291 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 NPTNQ9Y639 398 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 OR5H1A6NKK0 313 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 CDX4O14627 284 aaPredicted RBP13.86□□□□□ -0.19
GNE-202ENST00000396594 SPRY3O43610 288 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 IGHV4-34P06331 123 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 FBXW9Q5XUX1 488 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 CADM3Q8N126 398 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 ZNF439Q8NDP4 499 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 PTPMT1Q8WUK0 201 aaPredicted RBP13.86□□□□□ -0.19
GNE-202ENST00000396594 NTMQ9P121 344 aa13.86□□□□□ -0.19
GNE-202ENST00000396594 RNASEK-C17orf49H0YIS7 233 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 SLC25A6P12236 298 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 FSTP19883 344 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 HNF1AP20823 631 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 SNRPNP63162 240 aaKnown RBP13.85□□□□□ -0.19
GNE-202ENST00000396594 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
GNE-202ENST00000396594 MOB3BQ86TA1 216 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 CCDC71Q8IV32 467 aaPredicted RBP13.85□□□□□ -0.19
GNE-202ENST00000396594 OR4A4PQ8NGN8 299 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 LILRB1Q8NHL6 650 aaPredicted RBP13.85□□□□□ -0.19
GNE-202ENST00000396594 CMBLQ96DG6 245 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 ADGRG7Q96K78 797 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 ZNF426Q9BUY5 554 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 NMES1Q9C002 83 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 PLAC1Q9HBJ0 212 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 GPR35Q9HC97 309 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 KCNMB2Q9Y691 235 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 C3orf85A0A1B0GTC6 90 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 EPHA2P29317 976 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 ELLP55199 621 aaPredicted RBP13.85□□□□□ -0.19
GNE-202ENST00000396594 TMPRSS3P57727 454 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 ZNF90Q03938 601 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 CLLU1Q5K131 121 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 ZNF774Q6NX45 483 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 UBE3DQ7Z6J8 389 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 ST8SIA2Q92186 375 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 OR2H1Q9GZK4 316 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 TXNL1O43396 289 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 ZFPL1O95159 310 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 CTRB1P17538 263 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 P2RY1P47900 373 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 COMPP49747 757 aaPredicted RBP13.85□□□□□ -0.19
GNE-202ENST00000396594 TOR2AQ5JU69 321 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 CTRB2Q6GPI1 263 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 PRSS54Q6PEW0 395 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 ABHD14BQ96IU4 210 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 SLIRPQ9GZT3 109 aaKnown RBP13.85□□□□□ -0.19
GNE-202ENST00000396594 MANBALQ9NQG1 85 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 SEMG1P04279 462 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 MMP9P14780 707 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 CDKN2AP42771 156 aaKnown RBP13.85□□□□□ -0.19
GNE-202ENST00000396594 DEFB108BQ8NET1 73 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 OR1L1Q8NH94 360 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 ST8SIA4Q92187 359 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 ZNF501Q96CX3 271 aaPredicted RBP13.85□□□□□ -0.19
GNE-202ENST00000396594 PIPOXQ9P0Z9 390 aa13.85□□□□□ -0.19
GNE-202ENST00000396594 OR2C1O95371 312 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms