RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 PMS2P1A4D2B8 440 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 K7EPK0 472 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 IGHV2-70P01814 119 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 HEXAP06865 529 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 ACY1Q03154 408 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 NKAIN1Q4KMZ8 207 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 SLC25A47Q6Q0C1 308 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 C6orf201Q7Z4U5 140 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 FAM71E2Q8N5Q1 922 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 OR14K1Q8NGZ2 314 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 PECRQ9BY49 303 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 PNRC2Q9NPJ4 139 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 CER1O95813 267 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 IFNA2P01563 188 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 RPS2P15880 293 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 PTGER4P35408 488 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 ASCL1P50553 236 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 CLDN17P56750 224 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 PRAMEF20Q5VT98 475 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 KMT5CQ86Y97 462 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 CARFQ8N187 725 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 LRRC18Q8N456 261 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 SAT2Q96F10 170 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 BSCL2Q96G97 398 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 SMIM8Q96KF7 97 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 ZNF2Q9BSG1 426 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 C1orf123Q9NWV4 160 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 DNAJB11Q9UBS4 358 aa12.29□□□□□ -0.44
CCHCR1-203ENST00000396268 NCOA6Q14686 2063 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 ZFHX4Q86UP3 3567 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 TSPAN15O95858 294 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 FCGR3AP08637 254 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 HKR1P10072 659 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 LYL1P12980 280 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 RAB5AP20339 215 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 RPL12P30050 165 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 CHAF1BQ13112 559 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 RHBDD2Q6NTF9 364 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 C15orf54Q8N8G6 183 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 OR6X1Q8NH79 312 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 FNDC9Q8TBE3 224 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 TCTEX1D2Q8WW35 142 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 HDHD3Q9BSH5 251 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 PLEKHJ1Q9NW61 149 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 PISDQ9UG56 409 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 PUS1Q9Y606 427 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 URGCP-MRPS24S4R325 110 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 CFAP47Q6ZTR5 3102 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 KNTC1P50748 2209 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 IGKV1D-8A0A087WSZ0 117 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 FIGNL2A6NMB9 653 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 H7C1Q1 480 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 RPS10P46783 165 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 MIDNQ504T8 468 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 SULF2Q8IWU5 870 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 OR5L2Q8NGL0 311 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 OXGR1Q96P68 337 aa12.28□□□□□ -0.44
CCHCR1-203ENST00000396268 ZNF708P17019 499 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 FCGR2CP31995 323 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 NDUFA6P56556 154 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 GRB2P62993 217 aaKnown RBP12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 UBE2V2Q15819 145 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 NAT6Q93015 286 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 SPOCK3Q9BQ16 436 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 GGACTQ9BVM4 153 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 FBXL17Q9UF56 701 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 RARRES3Q9UL19 164 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 PIGLQ9Y2B2 252 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 RCL1Q9Y2P8 373 aaKnown RBP12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 RFNGQ9Y644 331 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 LOC400499M0QZD8 3231 aa12.27□□□□□ -0.44
CCHCR1-203ENST00000396268 TLX3O43711 291 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 MT-ND4LP03901 98 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 MSX1P28360 303 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 EIF2S3P41091 472 aaKnown RBP12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 SGPP2Q8IWX5 399 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 FAM89BQ8N5H3 189 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 ZNF565Q8N9K5 539 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 NAXEQ8NCW5 288 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 TOMM40LQ969M1 308 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 LYZL4Q96KX0 146 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 CNTNAP3Q9BZ76 1288 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 SEBOXQ9HB31 216 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 MYOTQ9UBF9 498 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 LAMA5O15230 3695 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 SDK2Q58EX2 2172 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 COL5A1P20908 1838 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 AHCTF1Q8WYP5 2266 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 OR5H15A6NDH6 313 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 DHRS7CA6NNS2 312 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 ZNF727A8MUV8 499 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 TAAR5O14804 337 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 ATXN7O15265 892 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 PRH1P02810 166 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 CD5P06127 495 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 CCL1P22362 96 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 PIGQQ9BRB3 760 aa12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 MCTS1Q9ULC4 181 aaKnown RBP12.27□□□□□ -0.45
CCHCR1-203ENST00000396268 A0A1B0GV90 55 aa12.26□□□□□ -0.45
CCHCR1-203ENST00000396268 SERPINE3A8MV23 424 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms